| Id Trinity | TRINITY_DN49940_c2_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_456295 |
| Sequence | CACAAATAAAAAACAATTCTTTATTGGAGTAAAAGCTTTCCTTGAATATTGGTCTTGGTGGAAGCTAGTGCAACAAAATGAGTGAGCTTCACGATCTCTC ATTCCACATTTTCTGATTGAAATTTTCTCTTTTTCGGATCACCACATGACCCTTTCTTTCTCTCTTTTTTTCCCAAAAATAAAAATATCTTCTTTCTCTC TCTCTCTCTCTTTGTTTTCTTGTTGCAAGAGTTTTTCATTTTTTTCTATTCCATATAGTTTTACCTTTCTGATATTCTTTGACCAACTCTTTCTTTTTCT AATCCCTTCTCCCTAAACAAAACACATTTTTTCACTATTTCTTTCTCTTTATTCTCCTTGTGTAGAAGATTCTACCAAGTGGGTCCTTTTCTTTTTGGTG TTCTTGTTTCTCTATAATAATGTCCTCTTGATTTTTTTGGAAACTGGGGTAGTCTCAAATTCAGAAAGGATGGGTTTTGATGATGACAAAGTCAATGAAG AAGGTGCAACAAAGGTTTCAGAAACGCACCATGCTGGAAAAACTGCCACTGATGAAGAAAGTGGTGATGAAGAAGGAAAAGGGACTCTTAGCAGGTACAA GAGTGAGAGTTCCATTGCTGCAACTGAAGATGAAGATGATGGTGATGATAGAAAAATTGAATTGGGTCCTCAGTGCACATTGAAGGAACAGCTTGAAAAG GATAAGGATGATGAGAGCTTGAGGAGGTGGAAGGAGCAGCTTCTTGGAAGTGTTGACATTAATGCTGTTGGAGAAACTCTGGAGCCAGAAGTGAAGATCT TGAGCCTTGCAATCAAATCTGCTGGAAGAGATGATATTTTTCTTCCAATACCAGAGGGAGGAAATCCAAAGGGCTCGTGGTTTACTTTGAAAGAAGGTAG CCGTTACAGGCTGATGTTCACTTTCCAGGTCAATAACAACATTGTTTCAGGTCTCAAATACACTCACAATGTGTGGAAAACTGGTATCAAGGGTGAGTTT TATTAATTTTCTCTGAATCAACTTATGCCGAACAGATACATATTTTTTCGGATAAAACATGTCATTGTTGAAACTTAATACAGTTGACAGCAGTAAAGAA ATGATTGGAACCTTCAGCCCCCAGGCAGAGCCTTACACCCATGAGATGCCTGAAGAGGTAACACCATCTGGGATGTTTGCTAGAGGAACATATTCAGCTA GAAGTAAGGTAATTCTTGAACATGTAACGTGTTCCCTAACCCCGGAGACATGAGTACTAGCTGCATACTATTTAACTACGAGTTAAGACGAGATATAATG TTGATAGTTTTTGTGTATTTACTTTTTCAATCAGCAATGAAGTATAAACATTGTTGAAAAGTATATATCTGAGAAGTTTGGAGGCCTATTATTGCCAATA AGATTATCTACACTGTCATTTAATATTGTTTCAATACATCATTTTATAAATTGGACAATGCAACACATCTAATATTTGATTCATGTAAAACTTTCTACAT TGACAATGCATGGAAGTTAAATCCAGCTACCTAAATGTATAGAATAAGAAAAAGTTAGTAGATCCTAAACTCTATCTGCTTCCACAGTGATATTATGACT TGTTTCAAGATCAGATGAACATGAATTAATGGCTCTTTTGCATATCAGCTCACCAATAAATGTTCTATGAAATTTAGCGCCGATAATCATGCGCCTAAAT ACAAAAACTTATTCAAATTTCTGAGTCACTTTTTTGTTCTCTCATGTCATTAATTTTTGTAGAAACTTCTCCTACATACAACTTAACCTGCTTTGTTGTT ATGTTGTGTTTCAGTTTGTTGATGATGACAACAAGTGCTACTTGGAGATCAACTACACTTTCGATATCCGGAAGGACTGGCAATAGTTTAGCCATAATGT TGTTATTTTTGCTGAAATCTCAGTGTTTTACTTCCTTATTTTTTCCATTGTTATATTTATTTTTAATCCTGTCTGAGACTGTAGTTTTAACAATGATGAG AGGATTTGGAGGATGAAATTGGTATTCATTTCATTGCTATAGTTTTGTCAATAAAATTTGAGTTTCTCAGTCTTGATTACATCAAGGTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_173419; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_456295
| Blastp | Rho GDP-dissociation inhibitor 1 from Arabidopsis with 72.59% of identity |
|---|---|
| Blastx | Rho GDP-dissociation inhibitor 1 from Arabidopsis with 60.22% of identity |
| Eggnog | Rho GDP dissociation inhibitor (GDI)(ENOG4111K44) |
| Kegg | Link to kegg annotations (AT3G07880) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417995.1) |
| Pfam | RHO protein GDP dissociation inhibitor (PF02115.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |