Id Trinity | TRINITY_DN49946_c3_g1_i25 |
---|---|
Name Transcript | Ll_transcript_458680 |
Sequence | CGTAGACCCTATCCTATAGTATATCCTCTCCCCTTCTTCAACGACAAACAGAAACTGAAACTGAAACACTTTTCATTTGAATTCCTTCTCTTCATTTCCC ACATGCCTTCCACTTCTACCCTCCACCGAAACGCCGTCGCTCAACCTCACAGACCAACCTCCAACTTCAGACCCCGCCTCTCTTCTTCTTCACCTTCCCC CCTCCGCCGCCGCTCCAGCCCCGCCCCAAATAATGCTCACGGAGGAGTGCCGGGAAGAGTTCGAGTATTTGTAAGATTGAGACCTCGAAATACTGAAGAA ATGATGGCTGATGCTGATTTTGCTGACTGTATTGAATTACAACCAGAGCTTAAAAGACTGAAGCTTCGGAAGAACAACTGGGATTCAGACACTTATGAGT TTGATGATGTGCTAACTGAATTTGCATCTCAGAAGCGTGTTTATGAAGTTGTAGCTAAGCCAGTTGTGGAGAGTGTTCTTGATGGCTATAATGGGACTGT TATGGCTTATGGTCAAACTGGAACAGGGAAAACCTTTACTCTTGGACAACTGTGGGAAGAAGACACCTCTGATCGTGGTGTCATGGTTCGTTCCATGGAG GATATCTTAGCTGACCTTTCTCCAATAACTGATTCTGTCACTGTCTCATATTTGCAGCTTTACATGGAGACTATCCAGGACTTGCTTAATCCGGTAAATG ATAATATTCCCATAGTTGAAGATCCAAGAACTGGTGAGGTGTCATTGCCTGGGGCAACTGTTGTAGAAATCAGGGGCCAGCAGAGCTTTCTGGAGTTGCT AAGAGTAGGGGAGGCTCATCGAGTTGTTGCTAACACAAAGTTGAATACTGAATCATCTCGTAGTCATGCTATTCTGATGGTACATGTTAAGAGGTGTGTA GTGGAAAGTGAAGATATTGTTTTTTCCGAAAATGACGATACTTCTCATTTAACCAAACCTTCAAAACCACTTGTTAGAAAGAGCAAGCTGGTTGTGGTTG ATTTGGCAGGATCTGAGCGTCTACATAAGTCAGGAAGTGAAGGACACATGCTAGAAGAAGCTAAATTTATCAATCTTTCACTTAGTACACTGGGAAAATG CATTAATGCTCTAGCAGGAAACAACACACATGTGCCATTTCGTGATTCAAAGCTTACTAGGTTGCTCAAAGACTCCTTTGGTGGAACAGCTAGGACTTCC TTAATAGTGACTGTTGGCCCATCTCCATGTCATCGAGGGGAGACTTCTAGTACCTTATTGTTTGGTCGAAGGTTACATTGATGCATATGCATGTCTCAGG CTATGAAAGTTGAGAATATGCTGAAAATAAAGGAGGAGTTTGATTATAAAAGTTTGTCTCGGAGCCTTGAGGTTCAGTTAGATAAACTTATTGCAGAAAA TGAAAGGCAGCAGAAAACTTTTGAAGATGAAGTTGAAAAAATAAATTTTGAGGCACAATGTCATATTGCTGAGGTTGAGAGGAATTTTGCAGATGCATTA GAGAAAGAGAGATTGAAAAGCCAAATGGAATACATGGAATTGGTAAAGGAGCTGGAGCAGAAGTTGGTTTTGAATCAAGAAAGACATGACAGCAATGGTT TTGTGGCTGATCTTGGACAGGGGCCTGCAGCATCTTCTCAAGATAAAGTTGCTGAGGTCAAAATGCAGCTCGAAACTGAAAGCAACCGAAGAAAGGCTGC TGAAGGAGAGTTAGAATATCTAAAACGTCAGCTCGAGAGATACACACATTTAGAGGCAGGAGGAGGCGATGTGGAGATTATTAAGCTTCGCAACATCCTG GAGGATGAGGCTAATCAGAAAAAAAAAACTTGAAGAAGAAATAATTATATTAAGAAGTCAATTATTACAATTAAACTTTGAAGCTGACCAGGTATTTGTT TTACATTGATTTGATGGTGATAATGTTAGATAGGATTCTATGCATTGACTTTGCAGTTATGTTAAGCCTATTAATAATAAATACGTTAGTAGTCCTTTTA TCCGTGTATATTTGAAGACATTGTAACCAGAAGTCCCTACCTAATTAAAAGACATGATTTTTTAATGCAAGAGAAGTTATTAGAAATCAAGGAGTGTAAG TACTAGTGTACTATAGGGTGGGATGATAAGAAATGCTCCGATATCGAGGAATAAAGATTTGCTAAAAAATCACAAACTTTTCCAGTATCAATGAGTAACA GTTGTAGAAACTCCTTGAGACAAACATGACTAGAACACCTAATAAAGATCATAAACATGATCCTGTTCTATCAAACTTAAGTTCATATACATGCATTAAA TTGACCTTTTCTCTCAAATGCCAAAAACAACCTATGGTGCAGTGGTAATTGTTATTCGGACTTGCAAACTTCATTAACAAGTTTTGGAAAGTTTGGATGG CACATTAAAACTGATTACTGCTAATAATTGTTACGAAATGAAGGATTTTGTTTTGTTTTTAGCTTCTCCATAGCCTCTAGTTGTTAGTTATCTTGTTCTT TCTAGTGTAACTTTGACACAAGAGATTTAATGTTTTGTTCTATAGATGAGAAAGTGTTTGGACAGTGGCAGCTTTGGGAACACATTTTCTGGCACAGATT CTTCCACGGCTCTAGTTAGGCATTCCCAATTCAAAGACACTGGGAGTGGTCAGCAGTCATCCGTGGCTACGCTTTTTGAGCAAGTTGGGTTGCAAAAGAT TTTGTCCTTACTGGAGTCAGATGATGCCAATGTACGAATTCATGCTGTGAAAGTGGTGGCCAACCTAGCAGCTGAAGAGGCTAATCAAAAGAGAATAGTT GAAGCTGGTGGTCTTACTTCCTTGCTTATGCTTCTTAGAAGATATGAGGATGAAACTGTGCGCAGAGTAGCTGCTGGGGCAATTGCCAATCTTGCTATGA ATGAAGCAAATCAAGAACTTATAATGGCTGAAGGAGGAGTTACTCTGTTATCAATGACTGCATCTGATGCTGAAGATCCACAAACTCTTCGTATGGTTGC TGGGGCAATTGCTAACTTATGCGGAAATGATAAGATATTGACGAAGCTAAGATCTCAGGGAGGTATCACAGCTTTACTGGGAATTGTAAGATGCGGTCAT CCTGACGTTCTTTCTCAAGTTGCACGAGGAATTGCAAACTTTGCAAAATGCGAGTCTCGAGCTTCTAG BLAST |
Tissue | pods |
Gene name | LI_gene_173459; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_458680
Blastp | Kinesin-like protein KIN-UB from Arabidopsis with 77.96% of identity |
---|---|
Blastx | Kinesin-like protein KIN-UB from Arabidopsis with 70.93% of identity |
Eggnog | Kinesin family member(COG5059) |
Kegg | Link to kegg annotations (AT1G01950) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450008.1) |
Pfam | Microtubule binding (PF16796.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |