Ll_transcript_456352

• Id Trinity: TRINITY_DN49949_c1_g1_i3
• Name Transcript: Ll_transcript_456352
• Sequence: AATGAGGATGCAGTGACCTAACGTCTTGTTGGAAGTTGCTAAACCCTTTGAATGTGTTGAAATGCTAAACCATTTTCCTTTGCAACTTGCATTCACAACA CTTGAACAATGACCTGACCTCAGTGAATAACAACTTTTCATACAACACAGTGGCTCATGGCGGGTCCTCTTCTTCTTCGTTCTCTCTGGTCCTCTACTAC AAAATCCTCTCCTTCTCCCTCTTCTCCTTTCATTTCTAAACTCAACTACTTCTCACGCGCCTTCTCCTCCGCCTCCCCTGCCGCCGCACCTCCCGTCCCC TCCTCCCTCAACCCTAGCCACCTCCGAAACGTCGCCGTTATCGCTCATGTCGACCACGGTAAGACCACTCTCATGGATCGCCTCCTCCGCCAGTGCGGCG CCGATATCCCTCATGAACGCGCCATGGATTCAATCTCCCTTGAACGCGAGCGCGGTATCACTATTGCTTCCAAGGTTACATCCATTTCTTGGAAAGAATA TGAGCTGAATATGGTTGATACTCCCGGGCACGCTGATTTTGGCGGTGAAGTTGAACGTGTTGTTGGTATGGTTGAGGGAGCAATTTTGGTTGTTGATGCT GGTGAAGGTCCACTTGCGCAAACAAAATTTGTCCTTGCAAAGGCCTTAAAATATGGATTGCGGCCTATTCTTCTTTTAAACAAAGTAGATCGACCTTCAG TCACCGAGGAAACGTGTAATGAAGTTGAGAGTTTGGTGTTTGATCTATTTGCCAACCTGGGTGCTACAGAGGAACAACTAGACTTCCCAGTTCTTTATGC TTCTGCTAAAGATGGGTGGGCATCCACCACTTTTACTAAGGGTCCTCCTGATCAGGCCAAAAATATGTCACAGTTGCTTGATGCCATTGTTACACATGTC CTACCACCAAATGCAAGAATTGACGCTCCTTTCCAAATGCTGGTTTCAATGATGGAACGGGACTTCTATCTTGGGCGAATTTTGACTGGACGCATATATT CTGGGGTTGTTCGTGTTGGTGACAGGGTTCATGGACTACGTAATAACGACTCTGTTGCTGAAAAGATTGAAGATGGAAAGGTGGTGAAACTGATGAAAAA GAAGGGTATAAACATGGTTCCAATTGATTGTGCTGGAGGTGGTGATATTGTGTCAATTGCTGGCTTGACAAGCCCATCAATAGGCCATACAGTAGCCACT GTGGAGGCTATGTCTGTATTGCCCACAGTTGTATTGGATCCTCCAACAATTTCTATGACCTTTGGAGTAAATGACTCCCCATTGGCTGGTCGTGATGGCA CTCATTTGACTGGAGGAAGAATTGGTGACCGGCTTATGGCTGAAGCTGAAACAAACCTTGCCATCAATGTATTGCCAGGCTTATCAGAATCGTTTGAAGT TCAGGGAAGAGGAGAGCTCCAGCTGGGTATCCTAATTGAGAATATGAGACGTGAGGGATTTGAGTTATCTGTCTCCCCACCTAAAGTCATGTATAAAACT GAAAATGGTCAAAAGCTTGAGCCAGTTGAAGAAGTTACAATTGAGGTAAATGATGAGCATGTTGGGTTGGTCATGGAAGCCTTGTCTCATAGGCGAGCTG AAGTTACTGACATGGGTCCTGTCTCAGGAACTGTTGGTCGGACTAGATTGTCTTTGACTTGTCCATCAAGGGGACTAGTTGGTTATAGGAGTGTGTTTAG CACTGATACGCGTGGAACTGGATTTATGCATTGTGCTTTCTTCGCATATGAAAAATTCCGAGGCCGTCTTGGCAATGTTAGGAAAGGCGTACTGGTGTCA ATGGGTTATGGTACAGTCACAGCTCATGCATTGATGAGCTTAGAAGCTCGTGGGACTCTTTTTGTATCACCTGGAATGGAGGCATATGATGGAATGATTG TAGGAGAACACTCAAAGGATACAGATCTTGATGTCAATCCTGTGAGAGCTAAAGCACTTACAAATATCCGTTCTGCTTTCAAGGATGAGAATGTGAAGCT GACTCCTCCTCGCCTTATGACACTTGAAGAAGCTATTGGGTACGTAGCTTCCGATGAGCTTATTGAGGTTACACCGAAGTCCATCCGGTTACGGAAGAAA TACCTTGATGTTAACAAGCGCAAGACCATGAGTAAAAAACCAAGGGAGTGAGGAGATTTGCTCAACCAGATTTTGTAACAATAACTTATTTACATGGTAT AGTCATTACAACCATTTCTTCCTCCTCATAAACATTTTATACGTGAGTTGAAGTAATGTATTACATGTACTGCAGAAAGAAATATTCTTTGGTAGTGATA AGATAGCTCAATTTTGTATTTCTATGAAATGATTAATAATTGGCATAGGAACAAGTTGCTCATTATTATGTAATATCATAAAACGTTTGTTTCATAGATT AAGCTATAAAAGTTTGGAATAGTCAGAAAGGGGATTTTATTTGCTCAAGTTAATGGTTTAGTTGACATTTTCCACGTCCTTTGTTGTGATGTTTGATGCC CTGGATTTGATATCATTTCATTTCACTTTTTCTTAATCCCATGAACCAATTCTTTATTTGCAAAAAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_173480;
• Additional information: details;

Expression of Ll_transcript_456352

FPKM

• PAB: 0.7
• PNAB: 5
• PS1: 2.5
• PS2: 1.6
• PS3: 2.1
• PW1: 3.2
• PW2: 2.3
• PW3: 2.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456352

• Blastp: GTP-binding protein TypA/BipA homolog from Helicobacter with 46.39% of identity
• Blastx: GTP-binding protein TypA/BipA homolog from Helicobacter with 46.23% of identity
• Eggnog: gtp-binding protein typa(COG1217)
• Kegg: Link to kegg annotations (C694_02460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453688.1)
• Pfam: Elongation factor Tu GTP binding domain (PF00009.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;