Ll_transcript_456354

• Id Trinity: TRINITY_DN49949_c1_g1_i5
• Name Transcript: Ll_transcript_456354
• Sequence: GCTAAACCCTTTTGCTGTTGTGTTGAAAGTGCAAAACCCTTTTCCCTTTGCATCCACACAACACACATACATGGGAACAGTGTTGCGCTGCTAAGACCTG AGGGAACAGTGTGGTTGTTTGTGTCTTCATGGCGGCTCCTTTTCTTCTTCGTTCTCTCTTCTCCTCTTCTCGAAAATCCTCTCCCACTTCTTCTCTCACT CCATCTCGCTTCTTCTCTAAACTCAACCACTTCTCACGCGCTTTCTCCTCCGCCGCTTCCGCCGCCACCGCTCCCACCTCTTCCGCTGCAACCCTAGACC CCAGCCACCTCCGAAACGTGGCGGTTATCGCTCATGTCGACCACGGCAAGACTACTCTCATGGATCGGCTGCTTCGTCAATGCGGCGCCGATATCCCTCA CGAACGAGCGATGGATTCAATCTCCCTTGAACGGGAGCGTGGAATCACTATTTCTTCGAAGGTTACATCCATTACTTGGAAAGAAAATGAGCTGAACATG GTTGATACTCCTGGACATGCTGATTTTGGTGGTGAAGTTGAACGTGTTGTTGGCATGGTTGAGGGAGCAATTTTGGTTGTTGATGCTGGTGAAGGTCCAC TTGCGCAAACAAAATTTGTCCTTGCAAAAGCCTTAAAGTATGGATTGCGGCCTATTCTTCTCATGAACAAAGTAGATCGACCTTCAGTTACTGTGGAGAC ATGTAATGAAGTTGAGAGTTTAGTGTTTGATCTATTTGCCAACCTGGGTGCTACAGAGGAACAACTAGACTTCCCAGTTCTTTATGCTTCTGCTAAAGAA GGATGGGCATCCACCACCTTTACCAAGGATCCTCCGGCTGAGGCCAAAAATATGTCACAGTTACTTGATGTCATTGTTTCACATGTCCTACCTCCAAACG CAAGCATCGATGCTCCTTTCCAAATGCTGGTTTCAATGATGGAACGAGACTTCTATCTTGGGCGGATTTTGACTGGACGCGTATATTCTGGGGTTGTTCG TATTGGTGACAGGGTTCATGGACTACGTAATAATGATTCTGTTGCTGAAAAGATTGAAGACGGAAAGGTGGTGAAAGTCATGAAAAAGAAGGGAACGATC ATGGTCCCAGTTGATTGTGCTGGAGCTGGTGATATAATTTCAATTGCTGGCTTGGCAACTCCATCAATAGGCCATACAGTAGCCACTGTGGAGGTCATGT CTGTATTGCCCACAGTTGTATTGGATCCTCCAACAATCTCCATGACTTTTGGAGTAAATGACTCTCCATTGGCTGGTCGTGATGGCACTCATTTGACTGG AGGAAGAATTGGTGACCGACTGATGGCTGAAGCTGAAACAAATCTTGCCATAAATGTACTTCCAGGCATATCAGAATCATTTGAAGTTCAGGGAAGAGGA GAGCTACAACTGGGTATCCTAATTGAGAATATGAGACGTGAGGGATTTGAGTTATCCGTATCGCCACCTAAAGTCATGTATAAAACTGAAAATGGTCAGA AACTTGAGCCAGTAGAAGAAGTTACAATTGAGGTAAATGATGAGCATGTTGGGTTGGTCATGGAGGCATTGTCTCATAGGCGAGCTGAGGTTACTGATAT GGGTCCTGTCTCAGGAACAGTTGGTCGGACCAGATTGTCTTTGACTTGTCCATCAAGGGGCCTGGTTGGTTACAGGAGTGTGTTCAGCACTGACACACGT GGAACTGGATTTATGCATTGTGCTTTCTCCGCATATGAAAAATATCGAGGCGCTCTTGGCAATGTTAGGAAAGGAGTGCTGGTTTCAATGGGTTATGGTA CAATCACAGCTCATGCATTGATGAGCTTAGAAGCTCGTGGAACCCTTTTCGTATCACCTGGAATGGAGACATACGATGGAATGATTGTAGGAGAACACTC AAAGGATACAGATCTTGATGTCAATCCTGTGAGAGCTAAAGCACTTACAAATGTGCGTGCTGCTTCCAAGGATGAGAATGTGAAGCTGACTCCCCCTCGC CTTATAACACTTGAAGAAGCTATCGGGTATGTAGCTTCGGATGAGCTTATTGAGGTTACACCTAAGTCCATCCGGTTACGGAAGAAATACCTTGATGTTA ACAAACGTAAGACCATGAGTAGAAGACCAAGGGAATGAGGAGTTTGGCTGGACTGAATTTTGTAAGAATAATTTATTTAGTGTACGGTATAGCCATTACA ACCATTTTATATATTAATTCTAGCAGGTATTACATGCACTGCAAAAAGAAATATTCATTGGTAGTGATAAGGTAGCTCAATTTTGTATTTCCAGCAATGG TTAATAATTGGCAATGGGACAAGTTTCTCATTGTTATGTAATATTCCTGAAACCTTTGTTTCAAAGATTAAGCTGTAAAAGTATGAAATAGTCAGAAAGG GGATTTTATTTGCATGAGTTAATGGTTTAGACATTTTTCACATCTTTTGCTGTGGTGCCATGGATTTGATAACATTTTAAATTCACCTTTTTCCAATCCC AAG
• Tissue: pods
• Gene name: LI_gene_173480;
• Additional information: details;

Expression of Ll_transcript_456354

FPKM

• PAB: 0.5
• PNAB: 13.4
• PS1: 6.5
• PS2: 6.4
• PS3: 7.3
• PW1: 11.8
• PW2: 10
• PW3: 8.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456354

• Blastp: GTP-binding protein TypA/BipA homolog from Helicobacter with 46.04% of identity
• Blastx: GTP-binding protein TypA/BipA homolog from Helicobacter with 45.66% of identity
• Eggnog: gtp-binding protein typa(COG1217)
• Kegg: Link to kegg annotations (C694_02460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413804.1)
• Pfam: Elongation factor Tu GTP binding domain (PF00009.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;