Ll_transcript_456356

• Id Trinity: TRINITY_DN49949_c1_g1_i7
• Name Transcript: Ll_transcript_456356
• Sequence: AATGAGGATGCAGTGACCTAACGTCTTGTTGGAAGTTGCTAAACCCTTTGAATGTGTTGAAATGCTAAACCATTTTCCTTTGCAACTTGCATTCACAACA CTTGAACAATGACCTGACCTCAGTGAATAACAACTTTTCATACAACACAGTGGCTCATGGCGGGTCCTCTTCTTCTTCGTTCTCTCTGGTCCTCTACTAC AAAATCCTCTCCTTCTCCCTCTTCTCCTTTCATTTCTAAACTCAACTACTTCTCACGCGCCTTCTCCTCCGCCTCCCCTGCCGCCGCACCTCCCGTCCCC TCCTCCCTCAACCCTAGCCACCTCCGAAACGTCGCCGTTATCGCTCATGTCGACCACGGTAAGACCACTCTCATGGATCGCCTCCTCCGCCAGTGCGGCG CCGATATCCCTCATGAACGCGCCATGGATTCAATCTCCCTTGAACGCGAGCGCGGTATCACTATTGCTTCCAAGGTTACATCCATTTCTTGGAAAGAATA TGAGCTGAATATGGTTGATACTCCCGGGCACGCTGATTTTGGCGGTGAAGTTGAACGTGTTGTTGGTATGGTTGAGGGAGCAATTTTGGTTGTTGATGCT GGTGAAGGTCCACTTGCGCAAACAAAATTTGTCCTTGCAAAGGCCTTAAAATATGGATTGCGGCCTATTCTTCTTTTAAACAAAGTAGATCGACCTTCAG TCACCGAGGAAACGTGTAATGAAGTTGAGAGTTTGGTGTTTGATCTATTTGCCAACCTGGGTGCTACAGAGGAACAACTAGACTTCCCAGTTCTTTATGC TTCTGCTAAAGATGGGTGGGCATCCACCACTTTTACTAAGGGTCCTCCTGATCAGGCCAAAAATATGTCACAGTTGCTTGATGCCATTGTTACACATGTC CTACCACCAAATGCAAGAATTGACGCTCCTTTCCAAATGCTGGTTTCAATGATGGAACGGGACTTCTATCTTGGGCGAATTTTGACTGGACGCATATATT CTGGGGTTGTTCGTGTTGGTGACAGGGTTCATGGACTACGTAATAACGACTCTGTTGCTGAAAAGATTGAAGATGGAAAGGTGGTGAAACTGATGAAAAA GAAGGGTATAAACATGGTTCCAATTGATTGTGCTGGAGGTGGTGATATTGTGTCAATTGCTGGCTTGACAAGCCCATCAATAGGCCATACAGTAGCCACT GTGGAGGCTATGTCTGTATTGCCCACAGTTGTATTGGATCCTCCAACAATTTCTATGACCTTTGGAGTAAATGACTCCCCATTGGCTGGTCGTGATGGCA CTCATTTGACTGGAGGAAGAATTGGTGACCGGCTTATGGCTGAAGCTGAAACAAACCTTGCCATCAATGTATTGCCAGGCTTATCAGAATCGTTTGAAGT TCAGGGAAGAGGAGAGCTCCAGCTGGGTATCCTAATTGAGAATATGAGACGTGAGGGATTTGAGTTATCTGTCTCCCCACCTAAAGTCATGTATAAAACT GAAAATGGTCAAAAGCTTGAGCCAGTTGAAGAAGTTACAATTGAGGTAAATGATGAGCATGTTGGGTTGGTCATGGAAGCCTTGTCTCATAGGCGAGCTG AAGTTACTGACATGGGTCCTGTCTCAGGAACTGTTGGTCGGACTAGATTGTCTTTGACTTGTCCATCAAGGTTAGCCCAGTTGTCTGTTTTGAATTTATC TTCGATTAGTTTTTATCCCTGCACATAAATGATCTCTCTAGATCTCTCTCTCTCTCTATATATATATATATTTATATATAAACACTATAGATGCACATGG TTTTGTCAAAACCACATTTTTAGATCCTTTGTTTTTTCTTGTTGTTATCATTTCCCCTTCCTTAGGGATGGTGATAACCTCTTGCCATCCCAATGGCTTC CTTTAAGAACCTTGCTCTAAGTCTGGGATGATCGGAAAAGAAGAAAAGGTGAGGAATCTCTGAGTAAGTGCCTTTTCAATAATTGAACGCCAGTTAAATA TTTTAATGTAGATTTTAGATAATTTTTTCTCTTGGGGTAGCTCCTATTATAGAATATATCGTAGAATCTCATCTTAGGTTGTTGGGGTATGTGTCGAGGA AACTGATGGAAACCCCACTAAGAAGAGTAGATCAAATGAAGGTTTCACAAAAAAACCATGGGTGAAACAATCAAGAAGGATTTGGAGATCAAATGGGTTG TTGTTTTTTGTAAACTTGTAATGTTATCGAAACCAGTAGACTTATGTTACTTATTCAGAGTCCAAATTTCTGGTTGCCTCCCTAGTCTAGCTGAATTACT GCCCATAGATCTACTGGAGTAATTTTATCTTCTGGAATTTAGTTCATGTCTCCCATCATTAGAGATATAACTTTTCTGGCAATACAGTTTTAGTGAAATC AAATTATATTCAGTGTTCGAGAAACCTACTAAGTAACGTCTTTAATACTGTTTGTTCAGGGGACTAGTTGGTTATAGGAGTG
• Tissue: pods
• Gene name: LI_gene_173480;
• Additional information: details;

Expression of Ll_transcript_456356

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.2
• PS2: 0
• PS3: 0.4
• PW1: 0.1
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456356

• Blastp: GTP-binding protein TypA/BipA homolog from Haemophilus with 47.32% of identity
• Blastx: GTP-binding protein TypA/BipA homolog from Haemophilus with 48.25% of identity
• Eggnog: gtp-binding protein typa(COG1217)
• Kegg: Link to kegg annotations (HI0864)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453688.1)
• Pfam: Elongation factor Tu GTP binding domain (PF00009.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;