| Id Trinity | TRINITY_DN49949_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_456357 |
| Sequence | AATGAGGATGCAGTGACCTAACGTCTTGTTGGAAGTTGCTAAACCCTTTGAATGTGTTGAAATGCTAAACCATTTTCCTTTGCAACTTGCATTCACAACA CTTGAACAATGACCTGACCTCAGTGAATAACAACTTTTCATACAACACAGTGGCTCATGGCGGGTCCTCTTCTTCTTCGTTCTCTCTGGTCCTCTACTAC AAAATCCTCTCCTTCTCCCTCTTCTCCTTTCATTTCTAAACTCAACTACTTCTCACGCGCCTTCTCCTCCGCCTCCCCTGCCGCCGCACCTCCCGTCCCC TCCTCCCTCAACCCTAGCCACCTCCGAAACGTCGCCGTTATCGCTCATGTCGACCACGGTAAGACCACTCTCATGGATCGCCTCCTCCGCCAGTGCGGCG CCGATATCCCTCATGAACGCGCCATGGATTCAATCTCCCTTGAACGCGAGCGCGGTATCACTATTGCTTCCAAGGTTACATCCATTTCTTGGAAAGAATA TGAGCTGAATATGGTTGATACTCCCGGGCACGCTGATTTTGGCGGTGAAGTTGAACGTGTTGTTGGTATGGTTGAGGGAGCAATTTTGGTTGTTGATGCT GGTGAAGGTCCACTTGCGCAAACAAAATTTGTCCTTGCAAAGGCCTTAAAATATGGATTGCGGCCTATTCTTCTTTTAAACAAAGTAGATCGACCTTCAG TCACCGAGGAAACGTGTAATGAAGTTGAGAGTTTGGTGTTTGATCTATTTGCCAACCTGGGTGCTACAGAGGAACAACTAGACTTCCCAGTTCTTTATGC TTCTGCTAAAGATGGGTGGGCATCCACCACTTTTACTAAGGGTCCTCCTGATCAGGCCAAAAATATGTCACAGTTGCTTGATGCCATTGTTACACATGTC CTACCACCAAATGCAAGAATTGACGCTCCTTTCCAAATGCTGGTTTCAATGATGGAACGGGACTTCTATCTTGGGCGAATTTTGACTGGACGCATATATT CTGGGGTTGTTCGTGTTGGTGACAGGGTTCATGGACTACGTAATAACGACTCTGTTGCTGAAAAGATTGAAGATGGAAAGGTGGTGAAACTGATGAAAAA GAAGGGTATAAACATGGTTCCAATTGATTGTGCTGGAGGTGGTGATATTGTGTCAATTGCTGGCTTGACAAGCCCATCAATAGGCCATACAGTAGCCACT GTGGAGGCTATGTCTGTATTGCCCACAGTTGTATTGGATCCTCCAACAATTTCTATGACCTTTGGAGTAAATGACTCCCCATTGGCTGGTCGTGATGGCA CTCATTTAACAGGCTAATGCTGACACCTTTTAGTTGACTGGAGGAAGAATTGGTGACCGGCTTATGGCTGAAGCTGAAACAAACCTTGCCATCAATGTAT TGCCAGGCTTATCAGAATCGTTTGAAGTTCAGGGAAGAGGAGAGCTCCAGCTGGGTATCCTAATTGAGAATATGAGACGTGAGGGATTTGAGTTATCTGT CTCCCCACCTAAAGTCATGTATAAAACTGAAAATGGTCAAAAGCTTGAGCCAGTTGAAGAAGTTACAATTGAGGTAAATGATGAGCATGTTGGGTTGGTC ATGGAAGCCTTGTCTCATAGGCGAGCTGAAGTTACTGACATGGGTCCTGTCTCAGGAACTGTTGGTCGGACTAGATTGTCTTTGACTTGTCCATCAAGGG GACTAGTTGGTTATAGGAGTGTGTTTAGCACTGATACGCGTGGAACTGGATTTATGCATTGTGCTTTCTTCGCATATGAAAAATTCCGAGGCCGTCTTGG CAATGTTAGGAAAGGCGTACTGGTGTCAATGGGTTATGGTACAGTCACAGCTCATGCATTGATGAGCTTAGAAGCTCGTGGGACTCTTTTTGTATCACCT GGAATGGAGGCATATGATGGAATGATTGTAGGAGAACACTCAAAGGATACAGATCTTGATGTCAATCCTGTGAGAGCTAAAGCACTTACAAATATCCGTT CTGCTTTCAAGGATGAGAATGTGAAGCTGACTCCTCCTCGCCTTATGACACTTGAAGAAGCTATTGGGTACGTAGCTTCCGATGAGCTTATTGAGGTTAC ACCGAAGTCCATCCGGTTACGGAAGAAATACCTTGATGTTAACAAGCGCAAGACCATGAGTAAAAAACCAAGGGAGTGAGGAGATTTGCTCAACCAGATT TTGTAACAATAACTTATTTACATGGTATAGTCATTACAACCATTTCTTCCTCCTCATAAACATTTTATACGTGAGTTGAAGTAATGTATTACATGTACTG CAGAAAGAAATATTCTTTGGTAGTGATAAGATAGCTCAATTTTGTATTTCTATGAAATGATTAATAATTGGCATAGGAACAAGTTGCTCATTATTATGTA ATATCATAAAACGTTTGTTTCATAGATTAAGCTATAAAAGTTTGGAATAGTCAGAAAGGGGATTTTATTTGCTCAAGTTAATGGTTTAGTTGACATTTTC CACGTCCTTTGTTGTGATGTTTGATGCCCTGGATTTGATATCATTTCATTTCACTTTTTCTTAATCCCATGAACCAATTCTTTATTTGCAAAAAAAAAAA AA BLAST |
| Tissue | pods |
| Gene name | LI_gene_173480; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_456357
| Blastp | GTP-binding protein TypA/BipA homolog from Haemophilus with 45.8% of identity |
|---|---|
| Blastx | GTP-binding protein TypA/BipA homolog from Helicobacter with 46.93% of identity |
| Eggnog | gtp-binding protein typa(COG1217) |
| Kegg | Link to kegg annotations (HI0864) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453688.1) |
| Pfam | Elongation factor Tu GTP binding domain (PF00009.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |