Ll_transcript_456111

• Id Trinity: TRINITY_DN49956_c2_g1_i1
• Name Transcript: Ll_transcript_456111
• Sequence: AAAATCTCTTTAATTTAAAACGCATTAAAAAAGAAAAAAAGAAAAACCCTTTATACCAAGTTCCTTCAAATCGCAGCGGCACTAACATTCCGAAACCCCA ATTTATAATGAGATTGGTGAATGATTCAACAGTCTCAGGGGTTCTACCTGATCCTCAGGGCTTCGTTGTTCACTACCCTGCTTATCCTTCTTCCCTCTCT CGCGCTATTCACACCCTTGGTGGTATTCCTTCCATCCTCAAGGTACATTCTACTCTTATCTTTTTCGTCGAACACCCGAAAGAGATTAGTTCCTTTACGA GAAAATAGATACCTTGATTATACAAAAAATCTTACAGCCGTTAAATTTATTATTCGTAGACTCGTAGTTCGCCATCAAATAAATTAGAGCTTCACTTCCG TCCTGAAGATCCGTACTCACATCCTGCGTTTGGAGAGCTTCGTCCTTGTAACAATTTTATTCTCAAAGTAACAAAGTCTAGAACAAACAATGTTCCTCAT TCTCACACGCGCTCTACTATTACAATGGATAATAATGAGATTCAACCAAATGAAGCGGTTACTGATCAAGTTGAAGATGCAATTCTTTCTGCTCAAATTG TTGCTCATATTCCCGAGGCTTATCATTTTGATGGAATGGTAGATTACCAACATGTTATTCCTGTTCATGCCGATGTTGCACGCAGGAAAAAGAGAAACTG GTCTGAATTAGAAGAACCACTTTTTGATAAAGGTGGTCTTATGGATTTGGATCATGAGGATGTTATGATTATAGTGCCTCCACTTTTTGCTCCAAAAGAT GTGCCAGAAAATTTAGTGTTGAGACCACCTTCAAATTTGAGCTCCAAAAAGAGACAAGAGGCAGTTGTAGAACAACCCCATTTCGAGATGGACATGGAGC CAGTTCTTGCAATTGATTTTGACATTAAAGAGATTCCTAAAATAGTGAATTGGGAGGAATACATACCAAAAGGCTCAGATCAGTGGGAGTCACAGATGGC TGTATCTAGAATGTTTGATGAACGGCCTATATGGTCGAAAGTTGCACTTACTGAACGCTTGCTTGATATGGGCATACGCTTCTCATATAGCATGCTCAGA AGGCTTCTATCTAGAATTTCTTACTACTTCTCCAGTGGACCATTTTTAAGATTCTGGATAAAGAAAGGTTATGATCCACGCAAAGACTCTAATTCTCGCA TTTATCAAAGAATTGATTATCGAGTACCAGTCCCATTACGAAGTTACTGTGATGCTAACTCAGCCAATAAATCGAAACCTAGATGGGAGGATATATGTGC TTTTCGTGCTTTCCCTTGCAAGTTTCAGACATCTTTACAGTTTTTTGATCTTGTTGATGATTATATTCAATCAGAAATAAATAAGCCTCCATCACAGGCA ACTTGCACTTTTGCTACTGGGTGGTTCTCACAGCATGTGATTGATTGTATTAGACAACGTCTTATGGTGAAGTTCCTATCAGTATTCCCCAAACCAGGTG CAGGAAATTTACTCAGATCTGCAACTGCTAGGTTTGAAAAATTGAAGAGGGAGATCAGTAGGAATCCCATTAAGCTTAATGGAGAGGAATGCCAACCAGC TAATTTAGATTTTGAAGAGAACAATGAACCTGGCAATGTTGAAGATGATGAAGAGGAGGAAGCTGAGGGTAATAATAGCGATGAGGAATGGGATGCTTAT GAAGAACCTGATATGGCTGGAGATAGTGAGATGCCTCTGCCTTCTCATTCTTGTATCCTTTTCTATAACTTTAAAGATTGAACCATATTATTGCATTGTA CAAGTTTATGTGATGAGGATGCAACTTGAAGATTCCGAGTCCTGAAATTCAGGCTACTTCATTGCTCCACTTTCAAATTTTTCATGCAGTGAGTGTTTCA CATTATTAAGCTATTAAGGCAGGAGTCAGAAGACCCTGAACCCACTTACAGATCTTCATATTGTCTGGGTTTGTCTTATTCCATACCACTAGTCCACTAA TGGAAAATATGAAATATCCATGACTTATTATCTGAATTACATAGCTAGATAGGTATGCAGAGGTCAAAGCTGGATTGATGAAGCCCAAGAATCTGTTTAG ATTTAGGGTTGGATGGAAAGGGAGTTATGATATAATCATAATTCTAATCCTAATAATAAGTTGAAAAGTAGCACCAAAATATATTTTCTGGATATGCTTG ACTCATACTGTTCTGAGTTTTAAATTCTGTTAGAATCACTATTTGTAGACCCCCAAATATATTAGGAACTGTCTGGACCCTTCATTGGCATAATTAACAA CTTTTGAATTTGATTGACTCTGGACTACCTATACTTCTTAAGAGTTCAGACCCTAAGTATGAGATTGGAATTTAGGTGTGGCTTTTAGTAGCTAAAATAT CCATGGATTTTTGTCATTTAAGTTAGGTTTCAGACTCAGGCTCTCAGGTAGATAGTGTCAGTAACCTCCCTTGTTAGCGTTTCCATCAATACTACACCCT TTCCCCTTGCCCTGTATGCAGAGTCCCAAATGTACCAGTGTACCTAATGCAGTTGGAATTATAATGAAGGTTGATGATACTAAGTTTAAATATTTTTACT TTTTATGTATTAGAGTCAGGAAAACCGTAAAAGGACTCAGTGCGGTGCAACAATCAAAATGTGACCCATCTTGATTATTCTTGCATCATCTTGATGTCTA AGTTGATTGTTAGATTTTCTCAAATGTCTTTCAAAGATTTGCAGGCAATTTTGTGTTCCTTAATGAATGTTCAGATCTCAACATGGATAATATTTCAAGG AGCCACTTGCAGGAGCTTTTTGATAGCTTTCCCTCTATCGAAGTTGATAGTGAAGTTCAAGAAAATGGCAGTGACGAAGAGTATCGCATATACGAGGAAG ATAGTGACGATGACAACTCTGATGAATGATTGCTTACACTAAGAACTGTCAGATACACACATCTCCATCCTATCTATGCCTCAGTGGTTTTTGTAGTTGT GGGTGTTTTGTAAATAGGAGGGTCATATGGGAATTAGATACAATTAGTTATATATAATATGAGAATATCAGCGATCTAGTGGTCAGTTCTTGTTCTTGAC TTGGAGTTACTGTGTCTTGCTAATGCTATTGAAGGGTTTGGGAAGAAGAAAAGTTTGTGGGTGGGTTCAAGATACTGATTCTTGGTATTTGCTCTGCTCC ATTGCTTCTTGATATTTGCAAATTTGTAACTCGTTATGACTTATGACAACCGAAAGAATAAACCAAATCATGCTCTATTCATTACTGCATCC
• Tissue: pods
• Gene name: LI_gene_173529;
• Additional information: details;

Expression of Ll_transcript_456111

FPKM

• PAB: 0.2
• PNAB: 0.4
• PS1: 0.7
• PS2: 0.1
• PS3: 0.1
• PW1: 0.7
• PW2: 0.4
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456111

• Blastp: General transcription factor 3C polypeptide 5 from Mus with 24.23% of identity
• Blastx: General transcription factor 3C polypeptide 5 from Homo with 25% of identity
• Eggnog: transcription factor(ENOG4111DXH)
• Kegg: Link to kegg annotations (70239)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444865.1)
• Pfam: RNA polymerase III transcription factor (TF)IIIC subunit (PF09734.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;