Ll_transcript_456120

• Id Trinity: TRINITY_DN49956_c2_g1_i7
• Name Transcript: Ll_transcript_456120
• Sequence: AAAATCTCTTTAATTTAAAACGCATTAAAAAAGAAAAAAAGAAAAACCCTTTATACCAAGTTCCTTCAAATCGCAGCGGCACTAACATTCCGAAACCCCA ATTTATAATGAGATTGGTGAATGATTCAACAGTCTCAGGGGTTCTACCTGATCCTCAGGGCTTCGTTGTTCACTACCCTGCTTATCCTTCTTCCCTCTCT CGCGCTATTCACACCCTTGGTGGTATTCCTTCCATCCTCAAGACTCGTAGTTCGCCATCAAATAAATTAGAGCTTCACTTCCGTCCTGAAGATCCGTACT CACATCCTGCGTTTGGAGAGCTTCGTCCTTGTAACAATTTTATTCTCAAAGTAACAAAGTCTAGAACAAACAATGTTCCTCATTCTCACACGCGCTCTAC TATTACAATGGATAATAATGAGATTCAACCAAATGAAGCGGTTACTGATCAAGTTGAAGATGCAATTCTTTCTGCTCAAATTGTTGCTCATATTCCCGAG GCTTATCATTTTGATGGAATGGTAGATTACCAACATGTTATTCCTGTTCATGCCGATGTTGCACGCAGGAAAAAGAGAAACTGGTCTGAATTAGAAGAAC CACTTTTTGATAAAGGTGGTCTTATGGATTTGGATCATGAGGATGTTATGATTATAGTGCCTCCACTTTTTGCTCCAAAAGATGTGCCAGAAAATTTAGT GTTGAGACCACCTTCAAATTTGAGCTCCAAAAAGAGACAAGAGGCAGTTGTAGAACAACCCCATTTCGAGATGGACATGGAGCCAGTTCTTGCAATTGAT TTTGACATTAAAGAGATTCCTAAAATAGTGAATTGGGAGGAATACATACCAAAAGGCTCAGATCAGTGGGAGTCACAGATGGCTGTATCTAGAATGTTTG ATGAACGGCCTATATGGTCGAAAGTTGCACTTACTGAACGCTTGCTTGATATGGGCATACGCTTCTCATATAGCATGCTCAGAAGGCTTCTATCTAGAAT TTCTTACTACTTCTCCAGTGGACCATTTTTAAGATTCTGGATAAAGAAAGGTTATGATCCACGCAAAGACTCTAATTCTCGCATTTATCAAAGAATTGAT TATCGAGTACCAGTCCCATTACGAAGTTACTGTGATGCTAACTCAGCCAATAAATCGAAACCTAGATGGGAGGATATATGTGCTTTTCGTGCTTTCCCTT GCAAGTTTCAGACATCTTTACAGTTTTTTGATCTTGTTGATGATTATATTCAATCAGAAATAAATAAGCCTCCATCACAGGCAACTTGCACTTTTGCTAC TGGGTGGTTCTCACAGCATGTGATTGATTGTATTAGACAACGTCTTATGGTGAAGTTCCTATCAGTATTCCCCAAACCAGGTGCAGGAAATTTACTCAGA TCTGCAACTGCTAGGTTTGAAAAATTGAAGAGGGAGATCAGTAGGAATCCCATTAAGCTTAATGGAGAGGAATGCCAACCAGCTAATTTAGATTTTGAAG AGAACAATGAACCTGGCAATGTTGAAGATGATGAAGAGGAGGAAGCTGAGGGTAATAATAGCGATGAGGAATGGGATGCTTATGAAGAACCTGATATGGC TGGAGATAGTGAGATGCCTCTGCCTTCTCATTCTTATCTCAACATGGATAATATTTCAAGGAGCCACTTGCAGGAGCTTTTTGATAGCTTTCCCTCTATC GAAGTTGATAGTGAAGTTCAAGAAAATGGCAGTGACGAAGAGTATCGCATATACGAGGAAGATAGTGACGATGACAACTCTGATGAATGATTGCTTACAC TAAGAACTGTCAGATACACACATCTCCATCCTATCTATGCCTCAGTGGTTTTTGTAGTTGTGGGTGTTTTGTAAATAGGAGGGTCATATGGGAATTAGAT ACAATTAGTTATATATAATATGAGAATATCAGCGATCTAGTGGTCAGTTCTTGTTCTTGACTTGGAGTTACTGTGTCTTGCTAATGCTATTGAAGGGTTT GGGAAGAAGAAAAGTTTGTGGGTGGGTTCAAGATACTGATTCTTGGTATTTGCTCTGCTCCATTGCTTCTTGATATTTGCAAATTTGTAACTCGTTATGA CTTATGACAACCGAAAGAATAAACCAAATCATGCTCTATTCATTACTGCATCC
• Tissue: pods
• Gene name: LI_gene_173529;
• Additional information: details;

Expression of Ll_transcript_456120

FPKM

• PAB: 3
• PNAB: 9.5
• PS1: 15.2
• PS2: 11
• PS3: 13.9
• PW1: 12.6
• PW2: 12.4
• PW3: 11.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456120

• Blastp: General transcription factor 3C polypeptide 5 from Homo with 26.04% of identity
• Blastx: General transcription factor 3C polypeptide 5 from Homo with 25.36% of identity
• Eggnog: transcription factor(ENOG4111DXH)
• Kegg: Link to kegg annotations (9328)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444865.1)
• Pfam: RNA polymerase III transcription factor (TF)IIIC subunit (PF09734.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;