| Id Trinity | TRINITY_DN49958_c1_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_457810 |
| Sequence | CCCAATCCCGCCAAAAAGGAAGAGTAGAAAAGCCATTGTTTGAGTGAAAGAAGAGAGAAAGGAGAGAGAATGGAAGGAAAAGGAACAGCAACAGCAACGG GTTGTTACAAGTGCGGTAAACCAGGTCATTGGTCCCGTGATTGCCCCTTCTCTCCTAACCCTAACCCTAACAATCCTAACCCTATTTCGAACAATCCTAA CCCTATTTCGAACAATCCTTCTTCTTCTTCTCTTCCTTCTTCCGAGAAGCCGAAGAAGCTTCCCAGAACTAGGCCCAAACTTACCCCCGATCTTCTCCTC TCCGACGATGGTTTCGGTTACGTTCTTCGCCATTTCCCTTCCCACTTCAAATATCGCGGTCGTGGCCACGAGGTTTCCGATCTCGGTAATCTCCTTCACT TATACTCTGATTGGCACTCTCGCCTCCTCCCTTATTACTCTTTCCCTCAATTCGTTTCTAAACTCCAGAAAGTTGCCGCCACTAGGCGCATCAAGACTTG CCTTAGAGAATTGAGAGAAAGAGTTGCGGATGGTGGAGATCCAACGAAAATGCGTGAACCACCGCTCTTCGATGACATTCTACCGGATCAACAAGGAGAT GTGGAAGCAGGTCAACAAGGGGGCGATGTGTTTTCAGAATTCCAAAATGTTGATGACGTTCAAGACATTCAAGAAGACATGCCTAATGATATATATGATA CAGCTACTGAAGTGAGTAATGTCTTTAAAACTGAGTTTCTTTATTATTGTGTAATATCTTCTATGTACTTATGATAACACATTTGAAAGGAACTCTGTCC ATATTTATCTGAAGCTATCATGGTGAAACAGATATAAAATTATCATTCAAGGATACTGGTTATCTGAAAATTTTGTGAAGATTGTGTGTAATCTGATTTT TTTTGGAAAGAGTTTATCTCAGGTTTAGTTAACCTTATCCAATAACACACTGAAAATGGGAGAATAGTGATACATGAGTGCTTGTCTGCTAGAGTATACA ACTTCATGCTCTTGAATGGTTTCATTTTTCATAGACTACTATACTACATGTGGTTTATATTCTTAGACAATTTTCGTTTAATGATAACTGTTTTGAAATC TCTAGTTATGTTCCTCGAGGGTGAGAACTTATCAGTGGCCCATGCTTCGTGTCTTCCTTCAATAGATCAGCTGCATACTAAATTTTGTGCGAACGCTAAG TGCCAATTTTTGGAAGGTGCTGAACCCATTGATATAGTTGCATGCTTGCTCTTAGAAGAGATAGAAAGTTGTTGGCTTCAAGGGATAGAACAAGGTGATT TGTCAGATTCTAGATTCACATCAGACGATCATCATGCTGGACAATGGTCTAATCAGGACGGGATTGAATCATTTGCAACTTGAAGTTAGACATGATTTTG TGAATTGTGATGTCACTCAGTTTTTGGCTATCATATGCTGTGATGTCACATGGTTATTAGTAGTTAAGTTTGCAACTGGACTATTCTTGAAACCATTAAA CCTGCGTTGGAATTTATTTCAACAAAGCCGAGATGACGAGCAGAGAATAAAACCGAGTTCAATAACTTAAATAAATCAAAAACAAAGGGATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_173553; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_457810
| Blastp | TIMELESS-interacting protein from Gallus with 33.33% of identity |
|---|---|
| Blastx | TIMELESS-interacting protein from Gallus with 33.78% of identity |
| Eggnog | Forms a fork protection complex (FPC) with tof1 and which is required for chromosome segregation during meiosis and DNA damage repair. FPC coordinates leading and lagging strand synthesis and moves with the replication fork. FPC stabilizes replication forks in a configuration that is recognized by replication checkpoint sensors (By similarity)(ENOG4111VXN) |
| Kegg | Link to kegg annotations (415548) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451182.1) |
| Pfam | Zinc knuckle (PF13917.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |