| Id Trinity | TRINITY_DN49967_c2_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_458127 |
| Sequence | AAGATTAACAAGCTCCATGATCAAAATCTGCTTCTCATCATCAACTCCTTCAATTTATAACCTTATTTACTTACCATTCATGATTCCTTTTCCACCACCA CACTTATTCTTCTTCTTATGGTTTCTTCTTCCTATCCCCTTCACTCAATCCGAATCATCCACATGCTTGACGGTCTACAATAGCGGTGGTGCTCCCGCAG TTTTCCAATCCCCAAAATGCCCTCGCTGGAAGCTCTCCGATTACGATTCCCCTTCTCAATCCACCGCGCGTTGCCACAACGCGATCCTACAAGGACGCAG AATCTCGCAAGAGGATCGCACTCTCTGTCTCCAAGACCTTCATATTCCATTCCCAGGTTCCTTCTCATTCTTCTAGAACCTTCTTTAGAACCGTTCCTTC TAACTCGTGAATTTCAGGTGTGAACGGGATCAAGGAGGTTGTGGTTGGGATTGTAGCGGTTTTCGATGGTCATAACGGCGCAGAAGCTAGTGACACGGCG TCAAAACTTTTGGTCGAGTATTTCGTTTTGCATACTTATTTTCTTATCGATGCTGCGTATTCTGTTATGTTCAAAACGTCAATGGGAGCATGGCCTCATA AGAGGGATCGTGATTGGGTAAACATGCTTCAAAGATGGAAAGAGCTATATAATGAAAGGTTTCAGAATACGTTTAGTGCAAATTTTGATGATTCTTTTCA CTTGGAAATTTTGAAGGAAGCATTGTTGAGAGCAATTCATGATATAGATGCAAAATTTTCTGAGGAAGCCTCTAGAAATAGCCTCTATTCAGGATCTACG GCAACCATTGCATTGATTGCTGATGATAAAGTTTTGGTTGCCAATATTGGAGACTCCAAGGCTTTCTTATGTTCTGAAAAATTTCTGTCTCCTAAAGAGG CAAAAGCCTCGTTAATAAAGGTACACAGGCAGAAAGAGCATGACGGTTCTGTTGCTGTGTGGGACCGTGAAAAGTATAGATTGGTTTCCTCCCAAGGACT CACTCATTTTGCAGTAAAAGAATTGACCAGTGATCATCACCCAGACAGAGATGATGAAAGAATTCGAGTGGAAACAGCTGGTGGTCAGGTTCTAACTTGG GGTGGGGTGCCACGCATAAACGGTCAGCTGGCTGTTTCACGAGCTATTGGTGATTTATTCCTTAAAGGATATGGTGTTATATCTGCACCAGAAGTGACTG ACTGGCAACCTCTGACTGCTAATGATAGCTATTTGGTGGCTGCATCTGATGGTGTTTTTGAGAAGATGAGCGTGCAGGATGTTTGTGATTTGTTGTGGGA AGTACACCGTTTCAGTAACATGAGATCTGAGTGTACCCCTTCATCTTCCTTTTCACTGGCAGAATTTATTGTTAAAACTGCCTTCGAAAAGGGAAGTATG GACAACGTGGCTGCAGTTGTCGTTCCTCTAGAATCTGCTAAATTTTCTGCAAACTCACCTAGGAGAAACTATATTGAAAATATTGATGCAGATTTTCCAC TAGTTGGTCTGCAGGATCTTGCTTCCAGAAGCTCAGCTAATGACATCACATTTGGTCTAAAGCACTTGGAGCATCACCATCCAGTGGACACCAAGTTTAA ACGCATACTGGTAGAAGTGAAACGTGGTGATTTTGGATGTTTTTATTTATCTGAAAATCTTGATGCATTGGTGGATTCTAAGCAGTCTGCCAATAAGATT GACTTGGAAGACTATTTGTATGAACTACCTCAGCCTTTACCAGATGCCCTTCATCAAGATTCTGCAGTAGGTGGTCCTTTACATTTGTACAATAACCAAA ACTTTTGCTTTCTCCCTGGTCTGACTGCCAGTGAAGACGAAGACCAATGCATAAATCCTGAAGGCTTTGCTAATTTTATTGGTCTTCTTGAATCGATTCC TTTACATGATACTGATCCAAATAATGGGTCTTCTGATTATTCAATGCCTGATTTAAGGTATGTACTAAAGAAGAGTTTTGGTCGTGGATCATATGGTGAA GTATGGTTAGCTTTTCATTGGAATTGTAATCAAGGTAGCAATGCTGCAGAAATGAGCAAGGATGACAATAATAGAAACAGCAGCTCAACTATTCCTGATT GTCAGGATGGTCCTTCTAACTACACTTTGTACATTTTGAAACGTATAATGGTAGAGAGAGGGTCTGCTGTTTACTTAAGTGGACTGAGGGAGAAGCATTT TGGAGAAATCTTCTTAAATGCCTCTAGATGCTTTGAAGATCAATTATCAGCTGGAAAATCAAACTGTGTCTTGGAAACATCACAGTTTGGTTCTGAGAAT TCATTTCCAAACAAATTTCGGCATCAAAGAGCCATACACGAAGAAGGTTTGAGACATATTGCAAGATATGTGGAGTCTTTTGAGTCTCGATCAAATGAAA TATGGCTTGTGTTTAGTTATGAAGGTCTGTCATTGTCGAAACTTTTGTACACTGTGGAAGATGCAAATACTGCTGAAAAAGAAAAAACTGAGCAAGCAGA ACATGTTCAGATACTTCGCCCATCAAAGTGGTGGTATTGGTTGAAAACAACAGAAGAAGGGCAAGAGGAAATGCGCAAGCTTATCTGGCAGCTGTTGATG GCGCTCAAGTCTTGTCACGATCGTAATATCACACACAGGGACATTAAGCCTGAGAATATGGTGATATGCTTTGAAGACCAAGAGACTGGGAGATGCTTGA AAGAGATTCCAACTAAAATTAACAAGTTTTCCACCGAAATGCGAATTATCGACTTTGGTAGTGGAATTGATGAATTCACATTAAAACATCTATATGGATC TACTGGACCTTCTAGGTATCTGGCTCCTCTTTTCTACATACTGATTTCTAGTTATTATTATTATTATTGTTATTTTGTGATTATTGTGGTAAGTGTGTGC ATTTTGTTTCTTTAGAGCTGAACAAACTTATGAGTATACACCTCCTGAAGCTTTGCTAAATGCTACATGGTATCAAGGGCCAAGAAGCTCGACTTTGAAA TATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGTCGCCAAATGTTTTCCAGATAAATGCTTTTACACGCGCTCTTCTGGACCGGC AACTTGAGGGTTGGAATGAGGGTGTGAAGGAGCTGGCATACAAACTTAGATCATTCATGGAGTTGTGTATCTTAATCCCTGGGATTTCTGGAAGTTCCTC AAAAAAGTATCATACAGTGAACCAAGTTGGAGTTTCACCTGCTTCCTGGAAGTGTTCTGAAGAATTTTTTTCTCGTCAAATTAAGAGTCGGGATCCTCTT AAGATAGGTTTTTCAAATGTCTGGGCTTTACGGTTAGTGCGCCATCTGTTGCTCTGGGATCCAGAGGATCGACTAAGTGTTGATGAGGCATTACGACATC CCTATTTCCAACCTCCCCCAAAAACATGATTGTATGTATGGGAAACAAGGACCAGTGTCTTACACTTTTATTCATTGTCCTGGTGAATAGTGTGTGCCAC TTTGTGACTAATCTGAGAAGTCCTAATTGGTGAGGCTATACAGGAAATGAGTTGGTGTATCAAGCTTGACAAGATGATAGTTCTTCTTGCTAGCAGGACT GACTTTTGGACCAGATGGGGACAAGTTCATATTCTGTATAGTATTCTGTAATGTGTATTTCTGAACAAAAATATATTATCATGTTATGTGATCAGGAATT TTATAACTTTTCTCCTACAAGAATATTATTTACTGTAGTGTATAATTAAGCAATGTGGACAACATTCTTTCCAACACATTATCTATTGTCAATTCTTTGT TGGATCTGTTAAATGTATGGGTTCACTTTTATTTGTAGCTCCAGCATAAAATTCATCCAATAAATGTGTGATGGAATGAATAAATAAAAGCCCCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_173616; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_458127
| Blastp | Probable protein phosphatase 2C 51 from Arabidopsis with 47.72% of identity |
|---|---|
| Blastx | Probable inactive protein kinase At3g63330 from Arabidopsis with 63.23% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT3G63340) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452686.1) |
| Pfam | Protein phosphatase 2C (PF00481.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |