Ll_transcript_458112

• Id Trinity: TRINITY_DN49967_c2_g1_i4
• Name Transcript: Ll_transcript_458112
• Sequence: AAGATTAACAAGCTCCATGATCAAAATCTGCTTCTCATCATCAACTCCTTCAATTTATAACCTTATTTACTTACCATTCATGATTCCTTTTCCACCACCA CACTTATTCTTCTTCTTATGGTTTCTTCTTCCTATCCCCTTCACTCAATCCGAATCATCCACATGCTTGACGGTCTACAATAGCGGTGGTGCTCCCGCAG TTTTCCAATCCCCAAAATGCCCTCGCTGGAAGCTCTCCGATTACGATTCCCCTTCTCAATCCACCGCGCGTTGCCACAACGCGATCCTACAAGGACGCAG AATCTCGCAAGAGGATCGCACTCTCTGTCTCCAAGACCTTCATATTCCATTCCCAGGTTCCTTCTCATTCTTCTAGAACCTTCTTTAGAACCGTTCCTTC TAACTCGTGAATTTCAGGTGTGAACGGGATCAAGGAGGTTGTGGTTGGGATTGTAGCGGTTTTCGATGGTCATAACGGCGCAGAAGCTAGTGACACGGCG TCAAAACTTTTGGTCGAGTATTTCGTTTTGCATACTTATTTTCTTATCGATGCTGCGTATTCTGTTATGTTCAAAACGTCAATGGGAGCATGGCCTCATA AGAGGGATCGTGATTGGGTAAACATGCTTCAAAGATGGAAAGAGCTATATAATGAAAGGAAGCATTGTTGAGAGCAATTCATGATATAGATGCAAAATTT TCTGAGGAAGCCTCTAGAAATAGCCTCTATTCAGGATCTACGGCAACCATTGCATTGATTGCTGATGATAAAGTTTTGGTTGCCAATATTGGAGACTCCA AGGCTTTCTTATGTTCTGAAAAATTTCTGTCTCCTAAAGAGGCAAAAGCCTCGTTAATAAAGGTACACAGGCAGAAAGAGCATGACGGTTCTGTTGCTGT GTGGGACCGTGAAAAGTATAGATTGGTTTCCTCCCAAGGACTCACTCATTTTGCAGTAAAAGAATTGACCAGTGATCATCACCCAGACAGAGATGATGAA AGAATTCGAGTGGAAACAGCTGGTGGTCAGGTTCTAACTTGGGGTGGGGTGCCACGCATAAACGGTCAGCTGGCTGTTTCACGAGCTATTGGTGATTTAT TCCTTAAAGGATATGGTGTTATATCTGCACCAGAAGTGACTGACTGGCAACCTCTGACTGCTAATGATAGCTATTTGGTGGCTGCATCTGATGGTGTTTT TGAGAAGATGAGCGTGCAGGATGTTTGTGATTTGTTGTGGGAAGTACACCGTTTCAGTAACATGAGATCTGAGTGTACCCCTTCATCTTCCTTTTCACTG GCAGAATTTATTGTTAAAACTGCCTTCGAAAAGGGAAGTATGGACAACGTGGCTGCAGTTGTCGTTCCTCTAGAATCTGCTAAATTTTCTGCAAACTCAC CTAGGAGAAACTATATTGAAAATATTGATGCAGATTTTCCACTAGTTGGTCTGCAGGATCTTGCTTCCAGAAGCTCAGCTAATGACATCACATTTGGTCT AAAGCACTTGGAGCATCACCATCCAGTGGACACCAAGTTTAAACGCATACTGGTAGAAGTGAAACGTGGTGATTTTGGATGTTTTTATTTATCTGAAAAT CTTGATGCATTGGTGGATTCTAAGCAGTCTGCCAATAAGATTGACTTGGAAGACTATTTGTATGAACTACCTCAGCCTTTACCAGATGCCCTTCATCAAG ATTCTGCAGTAGGTGGTCCTTTACATTTGTACAATAACCAAAACTTTTGCTTTCTCCCTGGTCTGACTGCCAGTGAAGACGAAGACCAATGCATAAATCC TGAAGGCTTTGCTAATTTTATTGGTCTTCTTGAATCGATTCCTTTACATGATACTGATCCAAATAATGGGTCTTCTGATTATTCAATGCCTGATTTAAGG TATGTACTAAAGAAGAGTTTTGGTCGTGGATCATATGGTGAAGTATGGTTAGCTTTTCATTGGAATTGTAATCAAGGTAGCAATGCTGCAGAAATGAGCA AGGATGACAATAATAGAAACAGCAGCTCAACTATTCCTGATTGTCAGGATGGTCCTTCTAACTACACTTTGTACATTTTGAAACGTATAATGGTAGAGAG AGGGTCTGCTGTTTACTTAAGTGGACTGAGGGAGAAGCATTTTGGAGAAATCTTCTTAAATGCCTCTAGATGCTTTGAAGATCAATTATCAGCTGGAAAA TCAAACTGTGTCTTGGAAACATCACAGTTTGGTTCTGAGAATTCATTTCCAAACAAATTTCGGCATCAAAGAGCCATACACGAAGAAGGTTTGAGACATA TTGCAAGATATGTGGAGTCTTTTGAGTCTCGATCAAATGAAATATGGCTTGTGTTTAGTTATGAAGGTCTGTCATTGTCGAAACTTTTGTACACTGTGGA AGATGCAAATACTGCTGAAAAAGAAAAAACTGAGCAAGCAGAACATGTTCAGATACTTCGCCCATCAAAGTGGTGGTATTGGTTGAAAACAACAGAAGAA GGGCAAGAGGAAATGCGCAAGCTTATCTGGCAGCTGTTGATGGCGCTCAAGTCTTGTCACGATCGTAATATCACACACAGGGACATTAAGCCTGTTAATC ACAAGCTTACCATCGGTGATCCTTAGATGAATAGAATATGGTGATATGCTTTGAAGACCAAGAGACTGGGAGATGCTTGAAAGAGATTCCAACTAAAATT AACAAGTTTTCCACCGAAATGCGAATTATCGACTTTGGTAGTGGAATTGATGAATTCACATTAAAACATCTATATGGATCTACTGGACCTTCTAGAGCTG AACAAACTTATGAGTATACACCTCCTGAAGCTTTGCTAAATGCTACATGGTATCAAGGGCCAAGAAGCTCGACTTTGAAATATGACATGTGGAGTGTTGG TGTTGTGATGTTAGAGTTGGTCTTAGGGTCGCCAAATGTTTTCCAGATAAATGCTTTTACACGCGCTCTTCTGGACCGGCAACTTGAGGGTTGGAATGAG GGTGTGAAGGAGCTGGCATACAAACTTAGATCATTCATGGAGTTGTGTATCTTAATCCCTGGGATTTCTGGAAGTTCCTCAAAAAAGTATCATACAGTGA ACCAAGTTGGAGTTTCACCTGCTTCCTGGAAGTGTTCTGAAGAATTTTTTTCTCGTCAAATTAAGAGTCGGGATCCTCTTAAGATAGGTTTTTCAAATGT CTGGGCTTTACGGTTAGTGCGCCATCTGTTGCTCTGGGATCCAGAGGATCGACTAAGTGTTGATGAGGCATTACGACATCCCTATTTCCAACCTCCCCCA AAAACATGATTGTATGTATGGGAAACAAGGACCAGTGTCTTACACTTTTATTCATTGTCCTGGTGAATAGTGTGTGCCACTTTGTGACTAATCTGAGAAG TCCTAATTGGTGAGGCTATACAGGAAATGAGTTGGTGTATCAAGCTTGACAAGATGATAGTTCTTCTTGCTAGCAGGACTGACTTTTGGACCAGATGGGG ACAAGTTCATATTCTGTATAGTATTCTGTAATGTGTATTTCTGAACAAAAATATATTATCATGTTATGTGATCAGGAATTTTATAACTTTTCTCCTACAA GAATATTATTTACTGTAGTGTATAATTAAGCAATGTGGACAACATTCTTTCCAACACATTATCTATTGTCAATTCTTTGTTGGATCTGTTAAATGTATGG GTTCACTTTTATTTGTAGCTCCAGCATAAAATTCATCCAATAAATGTGTGATGGAATGAATAAATAAAAGCCCCT
• Tissue: pods
• Gene name: LI_gene_173616;
• Additional information: details;

Expression of Ll_transcript_458112

FPKM

• PAB: 0.5
• PNAB: 1.1
• PS1: 1
• PS2: 0.8
• PS3: 0.7
• PW1: 0.7
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_458112

• Blastp: Probable inactive protein kinase At3g63330 from Arabidopsis with 59.32% of identity
• Blastx: Probable inactive protein kinase At3g63330 from Arabidopsis with 70.18% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452686.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;