Ll_transcript_458117

• Id Trinity: TRINITY_DN49967_c2_g1_i6
• Name Transcript: Ll_transcript_458117
• Sequence: AAGATTAACAAGCTCCATGATCAAAATCTGCTTCTCATCATCAACTCCTTCAATTTATAACCTTATTTACTTACCATTCATGATTCCTTTTCCACCACCA CACTTATTCTTCTTCTTATGGTTTCTTCTTCCTATCCCCTTCACTCAATCCGAATCATCCACATGCTTGACGGTCTACAATAGCGGTGGTGCTCCCGCAG TTTTCCAATCCCCAAAATGCCCTCGCTGGAAGCTCTCCGATTACGATTCCCCTTCTCAATCCACCGCGCGTTGCCACAACGCGATCCTACAAGGACGCAG AATCTCGCAAGAGGATCGCACTCTCTGTCTCCAAGACCTTCATATTCCATTCCCAGGTTCCTTCTCATTCTTCTAGAACCTTCTTTAGAACCGTTCCTTC TAACTCGTGAATTTCAGGTGTGAACGGGATCAAGGAGGTTGTGGTTGGGATTGTAGCGGTTTTCGATGGTCATAACGGCGCAGAAGCTAGTGACACGGCG TCAAAACTTTTGGTCGAGTATTTCGTTTTGCATACTTATTTTCTTATCGATGCTGCGTATTCTGTTATGTTCAAAACGTCAATGGGAGCATGGCCTCATA AGAGGGATCGTGATTGGGTAAACATGCTTCAAAGATGGAAAGAGCTATATAATGAAAGGTTTCAGAATACGTTTAGTGCAAATTTTGATGATTCTTTTCA CTTGGAAATTTTGAAGGAAGCATTGTTGAGAGCAATTCATGATATAGATGCAAAATTTTCTGAGGAAGCCTCTAGAAATAGCCTCTATTCAGGATCTACG GCAACCATTGCATTGATTGCTGATGATAAAGTTTTGGTTGCCAATATTGGAGACTCCAAGGCTTTCTTATGTTCTGAAAAATTTCTGTCTCCTAAAGAGG CAAAAGCCTCGTTAATAAAGGTACACAGGCAGAAAGAGCATGACGGTTCTGTTGCTGTGTGGGACCGTGAAAAGTATAGATTGGTTTCCTCCCAAGGACT CACTCATTTTGCAGTAAAAGAATTGACCAGTGATCATCACCCAGACAGAGATGATGAAAGAATTCGAGTGGAAACAGCTGGTGGTCAGGTTCTAACTTGG GGTGGGGTGCCACGCATAAACGGTCAGCTGGCTGTTTCACGAGCTATTGGTGATTTATTCCTTAAAGGATATGGTGTTATATCTGCACCAGAAGTGACTG ACTGGCAACCTCTGACTGCTAATGATAGCTATTTGGTGGCTGCATCTGATGGTGTTTTTGAGAAGATGAGCGTGCAGGATGTTTGTGATTTGTTGTGGGA AGTACACCGTTTCAGTAACATGAGATCTGAGTGTACCCCTTCATCTTCCTTTTCACTGGCAGAATTTATTGTTAAAACTGCCTTCGAAAAGGGAAGTATG GACAACGTGGCTGCAGTTGTCGTTCCTCTAGAATCTGCTAAATTTTCTGCAAACTCACCTAGGAGAAACTATATTGAAAATATTGATGCAGATTTTCCAC TAGTTGGTCTGCAGGATCTTGCTTCCAGAAGCTCAGCTAATGACATCACATTTGGTCTAAAGCACTTGGAGCATCACCATCCAGTGGACACCAAGTTTAA ACGCATACTGGTAGAAGTGAAACGTGGTGATTTTGGATGTTTTTATTTATCTGAAAATCTTGATGCATTGGTGGATTCTAAGCAGTCTGCCAATAAGATT GACTTGGAAGACTATTTGTATGAACTACCTCAGCCTTTACCAGATGCCCTTCATCAAGATTCTGCAGTAGGTGGTCCTTTACATTTGTACAATAACCAAA ACTTTTGCTTTCTCCCTGGTCTGACTGCCAGTGAAGACGAAGACCAATGCATAAATCCTGAAGGCTTTGCTAATTTTATTGGTCTTCTTGAATCGATTCC TTTACATGATACTGATCCAAATAATGGGTCTTCTGATTATTCAATGCCTGATTTAAGGTATGTACTAAAGAAGAGTTTTGGTCGTGGATCATATGGTGAA GTATGGTTAGCTTTTCATTGGAATTGTAATCAAGGTAGCAATGCTGCAGAAATGAGCAAGGATGACAATAATAGAAACAGCAGCTCAACTATTCCTGATT GTCAGGATGGTCCTTCTAACTACACTTTGTACATTTTGAAACGTATAATGGTAGAGAGAGGGTCTGCTGTTTACTTAAGTGGACTGAGGGAGAAGCATTT TGGAGAAATCTTCTTAAATGCCTCTAGATGCTTTGAAGATCAATTATCAGCTGGAAAATCAAACTGTGTCTTGGAAACATCACAGTTTGGTTCTGAGAAT TCATTTCCAAACAAATTTCGGCATCAAAGAGCCATACACGAAGAAGGTTTGAGACATATTGCAAGATATGTGGAGTCTTTTGAGTCTCGATCAAATGAAA TATGGCTTGTGTTTAGTTATGAAGGTCTGTCATTGTCGAAACTTTTGTACACTGTGGAAGATGCAAATACTGCTGAAAAAGAAAAAACTGAGCAAGCAGA ACATGTTCAGATACTTCGCCCATCAAAGTGGTGGTATTGGTTGAAAACAACAGAAGAAGGGCAAGAGGAAATGCGCAAGCTTATCTGGCAGCTGTTGATG GCGCTCAAGTCTTGTCACGATCGTAATATCACACACAGGGACATTAAGCCTGAGAATATGGTGATATGCTTTGAAGACCAAGAGACTGGGAGATGCTTGA AAGAGATTCCAACTAAAATTAACAAGTTTTCCACCGAAATGCGAATTATCGACTTTGGTAGTGGAATTGATGAATTCACATTAAAACATCTATATGGATC TACTGGACCTTCTAGAGCTGAACAAACTTATGAGTATACACCTCCTGAAGCTTTGCTAAATGCTACATGGTATCAAGGGCCAAGAAGCTCGACTTTGAAA TATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGTCGCCAAATGTTTTCCAGATAAATGCTTTTACACGCGCTCTTCTGGACCGGC AACTTGAGGGTTGGAATGAGGGTGTGAAGGAGCTGGCATACAAACTTAGATCATTCATGGAGTTGTGTATCTTAATCCCTGGGATTTCTGGAAGTTCCTC AAAAAAGTATCATACAGTGAACCAAGTTGGAGTTTCACCTGCTTCCTGGAAGTGTTCTGAAGAATTTTTTTCTCGTCAAATTAAGAGTCGGGATCCTCTT AAGATAGGGTCAGCTCACTATCTTCTGATGCTTTCATTTTGCTCAATGTCATATACATTTAGTTTTCTCCCTCGGTACAATTGTTCTCGTGTCAGTATGC TTTTCTTGCTTTTGCAGTTTTTCAAATGTCTGGGCTTTACGGTTAGTGCGCCATCTGTTGCTCTGGGATCCAGAGGATCGACTAAGTGTTGATGAGGCAT TACGACATCCCTATTTCCAACCTCCCCCAAAAACATGATTGTATGTATGGGAAACAAGGACCAGTGTCTTACACTTTTATTCATTGTCCTGGTGAATAGT GTGTGCCACTTTGTGACTAATCTGAGAAGTCCTAATTGGTGAGGCTATACAGGAAATGAGTTGGTGTATCAAGCTTGACAAGATGATAGTTCTTCTTGCT AGCAGGACTGACTTTTGGACCAGATGGGGACAAGTTCATATTCTGTATAGTATTCTGTAATGTGTATTTCTGAACAAAAATATATTATCATGTTATGTGA TCAGGAATTTTATAACTTTTCTCCTACAAGAATATTATTTACTGTAGTGTATAATTAAGCAATGTGGACAACATTCTTTCCAACACATTATCTATTGTCA ATTCTTTGTTGGATCTGTTAAATGTATGGGTTCACTTTTATTTGTAGCTCCAGCATAAAATTCATCCAATAAATGTGTGATGGAATGAATAAATAAAAGC CCCT
• Tissue: pods
• Gene name: LI_gene_173616;
• Additional information: details;

Expression of Ll_transcript_458117

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0
• PS2: 0.2
• PS3: 0.1
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_458117

• Blastp: Probable inactive protein kinase At3g63330 from Arabidopsis with 65.36% of identity
• Blastx: Probable inactive protein kinase At3g63330 from Arabidopsis with 65.36% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452686.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;