Ll_transcript_456216

• Id Trinity: TRINITY_DN49969_c0_g1_i10
• Name Transcript: Ll_transcript_456216
• Sequence: CTTTTATTTTTTATTCTTCCAAAAAAAAAATTGAACAATGAATGATTGTGTATTAATTTTAACATCATCAATATATAATATTACAATAAAGGGGTACTAA ATACTTGGCAAAACCATTAACAAAAGTTGTGAACTTCTTCTTCTACTCACTAAAAACCTTTCAATCTTCTTTCTCATCTCTTTCTCTTATCTTCCCCCCA CTCTCACTTATAAATTTGTCTTCATTTGAATTTGCATTTGCATTTTCCAAAGGTGTTCTAAGCCTCTGAATCCACTTCATTCGGAAACGACGTCGTATTC TGAATCTGTTTCTCAAATTCACCCCAGAACCTTGCAATTCGTACCAACAAAAATTAGGGATCCCTAGCATTTGATCTCATTTTGCTTCAAGGAGGCTAGC CTAGTTTTGTATCATACTCGGGTGTCGAGGGTGACTCCGACCGTAGATCGGTTGTCTCTGTGTGCTGTCATCGAAGGAGCTGTCACTTGTCTATCCTTGC GCCAAGGCTCACCCTCCAGTAAGAAGAAAAGAGTGTAGGCTCAATAGTTGGTAAAGCTGAATTCAGAAACTTCACAAAAAATGGTTACATCATTAAGTAA TGGTCATTCCAAGGAAAAATTTAAGAAGCCACTGGTGGAAAATGGGGATTGCACTTTTCTTGTTCTGCCCAAATATAAGCGGCGAAAAGTTTCAGTAATT CGTGATTTCCCAGAAGGATGTGGCTTGTTTGGTTCAAAGATCCATCCTAAAACCATTTTCCAAACATTCGACCTTAGTTTGATGAAGGAAGATCCGGTGG TCTCATCTCATATGCATGCACCACCTCCTTTGGCAAACGATGAACCTGCTAATCAGCAGTTGGTGGGCGTGGAAGCAGCTTTGGAAGATACAGAGTTGAC AAGAACTCCAAAAGCTGTAAAATGTGGTTCCATCAGTATGTTGAATTCGCCTCCTACAGTGGACGAGGTGGCGTTTGTAGGTAGTTCAAAATTCTTATCA TCTGATTTGTCCATTTCTTGTTTGAAGAAGGCTGTAACTACAAGGTCTTTTCCTCGAAGAAAAGTTTCAGCTGTCAGATACTTTCCTCCGTTGTGTGGCA AAAATGCTTCACGTCTCAGGATTGACAGTGAATGTCTAAATGGGATCTCTTCTTTGGAGAACACGAGTAATGGTCTACAGAACATGGTTGTAGATGACAA GCCATTGGAAAAGGTAACAACAACTGATGCAAAGGAAGTAATGGCCATAGTTCAAGCTGAAAATCAAGGGGATGATGCTACTACAAATGTGAAGATACTT GATGTCTTTGAACCTTCTTCTATGGTGCAATTGCCACCGGAAAGCATAAGAGAAAGGTGCATTACGATTATTGGAGAAAGCAGTCATCACCAGGTTGAAA TAAATTCCAAGGCAGAAGATATAGAGAGAAATGGAGATGCTGTTCAGTTTGAGGGAACGTCAGGGAAAGCTATTATAGTTCTCCCTGAATGCCAAAGTCA TGAGACAAAGCCTTCAGAAATGCCTAATTGTCGACATGAGCCAAAAGGAGGTTTTGATGGATTGCAGGTTCATCACCAGGTTGAAATAAATTCCAAGGCA GAAGATATAGATGGAAATGGAGATGCTGTACAGTTTGAGGGTACATCAGGGAAAGAGATTTTAGTTCCCCTTGAATTCCAAAGTCATGAGACAAAGCCTT CAGAAATGCCTAATTGTAGTCATGCGCCAAAAGGAGGTTTGGATGGATTGCAGGTTGTACCTACCAAGACAGTAGTGCTGGGTCTGATGGCTGAATCTGA ATGTCCTCAGAGGCATGGTAAAGATTCCTCCAGATTTGATTTGATTGATGGTACAAATCAGAGCAAGCGAAAGAAAGTTGGTATTTTTGCACAGCATGAC ATGTCAAAAGCTGAGAAGAGAAAGGAGTCACCAAATCATGCTGGGAAGAAGCCTTCACAAAAGAAAAAGCAAAATGCTGCTTCTGAAGGTTCAGGTCAAT TGGTAAGTTGGGAAAATAACGATTCTCATTATTCTAATGAAGAAATTGCAGAATTTCGGGTCAACGAGAAATCACATGGTGCAAGTGTACAAGTTCCTCC TATTAGTCATCATAAAAATGACTCAAATGTGACCCGCAATAAAGTGAGGGAAACGTTGCGTTATTTCCATGCTGTTTATAGAAAGCTTTTGCATGAAGAT GAATCAAAGATAAAAAAGCAAACAGATGGTCCTAGAACTTTCCATACACAAGCAGCTAAGATCCTTAAGGAGCAAGGGAGATATATTAACACAGGCAAAC AGATCTTGGGATCTGTCCCTGGAGTTGAAGTTGGTGATGAATTTCAGTTTCGGCTGGAGCTTAATATTGTTGGCCTTCATCGGCAGGTTCAGGGTGGCAT AGATTATATGAATCACGACGGTAAGATCCTTGCCACAAGTGTTGTTGCGTCAGGGGGCCATGCTGATGAGTTAGATAATCCGGATGTCTTGATATATACA GGACAGGGTGGCAATTTGGTGAACTCTGATAAAGAACCCGAAGATCAGAAGCTTAAGCGAGGCAATCTTGCTTTAAAGAACAGCAGTGAGGAAAAGAATC CTGTTAGGGTGATTCGTGGCTCTGAATCAACAGATGGAAAGCTAAGGAGATATGTTTATGATGGACAGTATGTAGTTGACAAATATTGGCAAGATATGGG ACCACATGGTAAGCTGATTTTTAGGTTTCTGCTGCAAAGAATCCCAGGTCAGCCAGAGCTTGCATGGAAGGAAGTGGAAAAATCTAAAAAAATAAAGTTA AGAGAGGGTCTACGTGTTAATGATATTTCTCATGGGAAAGAGCGAATTCCGATATGTGCTGTGAACACCATAGATAATGAAAAGCCTCCTCCATTTAAAT ACATTACTAGAATGATATATCCTAATTGGTGCAATCCTATTCCTCCGGAAGGATGTGACTGTATTGACGGATGCTTCGACAAAGAGAAATGTGCTTGTGC AGCGAAAAATGGGGGAGATATCCCATTCAATCACAATGGAGCTATTGTAGAAGCAAAGTCTTTAGTCTATGAGTGTGGACCTTCTTGCAAATGCACCTCA TGCTACAATAGAGTCAGCCAACTGGGCATAAAGCTTCAGCTTGAAATTTTTAAAACCGAGAAAAGAGGGTGGGGAGTGAGATCTATAAACTTCATCTCTT CAGGAACTTTTATTTGTGAATACACAGGAGAGCTTCTTGAAGAGAAAGATGCTGAACAAAGAACTGGCTCTGATGAGTATCTTTTTGATATTGGGAATAA CTACAACAATCATACTTCTTCAGATGGGGCTTTGGCTGTTATACAACAGGATACACAGTCGGCTTCTTTCGAAGTTGTGGAGGGCAACAGCTTCACCATT GATGCAGCCGAGTATGGTAATCTGGGGAGATTCATCAACCATAGTTGCTCTCCTAATCTCTATGCTCAAAATGTCCTGTACGATCACAATGACGACAGGA TTCCTCACATAATGCTCTTCGCTGCTGACAACATTCCTCCCTTTCAAGAGCTAACCTATGATTACAATTACAAGATAGACCAAGTCTTTGATTCTGATGG AAAAATAAAAAGGAAGAATTGCTACTGTGGTTCTGTGGAGTGCACTGGTAGGATGTATTGAGACTTGACAAAGATTGTGGTTGTTGCTTATGGTGACTAC TCTAATAGTAAAGCAGAAATTATGAAAAACATGTTATCTCATCTGGAAAAGGAAAATGTTTTTACTAGAGTAATGCAATATGAAGATTTGTCTAATGGTG CAAGTGGTTCAGACAGTAGTCTAAACTCTGAAGTCTCTTTTCACACTTTCTCTCTCTCTTAAATTCTGTTTTCAATCTTCCTTTATTGTTTAGAGTGGAA TTTGTACCTTTCATATGGTACTATCTAGCATAACTCTTTTTACTATATGCTTATTTTATTCCTTGGATTATGCCAACCATGTCTATAGATTTAGGGTAGT TTGTATACACCTAGTTCAGGAGCCTTTTATCCTTTCAAATGAGAATGAACACATGCATCGTTTTCTTTCAGTCCATAACAAGAGAAGTCAGGCTGTCGCA CTTTTTTTTGTACTAACAAGAATAATTATCCTTTCCAACAAGTGTCGCTTCTAGTAATTGAATGCGCTGACCTTTTGGTTATTCTAGGAATCTAGCGGAT CATTACACCACTAGATCAACGTCTTGAGTAATTTGTATGTATCTGACTCTGATATTAAGGGACAAATTGTTTATCTAAATTGTTTGAGTAATTTGTATGC ACATAAACAATCTTTAAAATAGATAAT
• Tissue: pods
• Gene name: LI_gene_173636;
• Additional information: details;

Expression of Ll_transcript_456216

FPKM

• PAB: 0.5
• PNAB: 3
• PS1: 3
• PS2: 1.8
• PS3: 1.4
• PW1: 2.7
• PW2: 1.4
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456216

• Blastp: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 from Arabidopsis with 58.8% of identity
• Blastx: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 from Arabidopsis with 58.8% of identity
• Eggnog: Histone-lysine N-methyltransferase(COG2940)
• Kegg: Link to kegg annotations (AT2G35160)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422109.1)
• Pfam: SAD/SRA domain (PF02182.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;