Ll_transcript_456217

• Id Trinity: TRINITY_DN49969_c0_g1_i11
• Name Transcript: Ll_transcript_456217
• Sequence: GTCACAAGTTCAAATCCTTGAAATAACCTCTCCACTTGTTGGACAAGGCTGTATGCATCTACCCTTCCTATATCTCACTAGAGAAGAAAAGAGTGTAGGC TCAATAGTTGGTAAAGCTGAATTCAGAAACTTCACAAAAAATGGTTACATCATTAAGTAATGGTCATTCCAAGGAAAAATTTAAGAAGCCACTGGTGGAA AATGGGGATTGCACTTTTCTTGTTCTGCCCAAATATAAGCGGCGAAAAGTTTCAGTAATTCGTGATTTCCCAGAAGGATGTGGCTTGTTTGGTTCAAAGA TCCATCCTAAAACCATTTTCCAAACATTCGACCTTAGTTTGATGAAGGAAGATCCGGTGGTCTCATCTCATATGCATGCACCACCTCCTTTGGCAAACGA TGAACCTGCTAATCAGCAGTTGGTGGGCGTGGAAGCAGCTTTGGAAGATACAGAGTTGACAAGAACTCCAAAAGCTGTAAAATGTGGTTCCATCAGTATG TTGAATTCGCCTCCTACAGTGGACGAGGTGGCGTTTGTAGGTAGTTCAAAATTCTTATCATCTGATTTGTCCATTTCTTGTTTGAAGAAGGCTGTAACTA CAAGGTCTTTTCCTCGAAGAAAAGTTTCAGCTGTCAGATACTTTCCTCCGTTGTGTGGCAAAAATGCTTCACGTCTCAGGATTGACAGTGAATGTCTAAA TGGGATCTCTTCTTTGGAGAACACGAGTAATGGTCTACAGAACATGGTTGTAGATGACAAGCCATTGGAAAAGGTAACAACAACTGATGCAAAGGAAGTA ATGGCCATAGTTCAAGCTGAAAATCAAGGGGATGATGCTACTACAAATGTGAAGATACTTGATGTCTTTGAACCTTCTTCTATGGTGCAATTGCCACCGG AAAGCATAAGAGAAAGGTGCATTACGATTATTGGAGAAAGCAGTCATCACCAGGTTGAAATAAATTCCAAGGCAGAAGATATAGAGAGAAATGGAGATGC TGTTCAGTTTGAGGGAACGTCAGGGAAAGCTATTATAGTTCTCCCTGAATGCCAAAGTCATGAGACAAAGCCTTCAGAAATGCCTAATTGTCGACATGAG CCAAAAGGAGGTTTTGATGGATTGCAGGTTCATCACCAGGTTGAAATAAATTCCAAGGCAGAAGATATAGATGGAAATGGAGATGCTGTACAGTTTGAGG GTACATCAGGGAAAGAGATTTTAGTTCCCCTTGAATTCCAAAGTCATGAGACAAAGCCTTCAGAAATGCCTAATTGTAGTCATGCGCCAAAAGGAGGTTT GGATGGATTGCAGGTTGTACCTACCAAGACAGTAGTGCTGGGTCTGATGGCTGAATCTGAATGTCCTCAGAGGCATGGTAAAGATTCCTCCAGATTTGAT TTGATTGATGGTACAAATCAGAGCAAGCGAAAGAAAGTTGGTATTTTTGCACAGCATGACATGTCAAAAGCTGAGAAGAGAAAGGAGTCACCAAATCATG CTGGGAAGAAGCCTTCACAAAAGAAAAAGCAAAATGCTGCTTCTGAAGGTTCAGGTCAATTGGTAAGTTGGGAAAATAACGATTCTCATTATTCTAATGA AGAAATTGCAGAATTTCGGGTCAACGAGAAATCACATGGTGCAAGTGTACAAGTTCCTCCTATTAGTCATCATAAAAATGACTCAAATGTGACCCGCAAT AAAGTGAGGGAAACGTTGCGTTATTTCCATGCTGTTTATAGAAAGCTTTTGCATGAAGATGAATCAAAGATAAAAAAGCAAACAGATGGTCCTAGAACTT TCCATACACAAGCAGCTAAGATCCTTAAGGAGCAAGGGAGATATATTAACACAGGCAAACAGATCTTGGGATCTGTCCCTGGAGTTGAAGTTGGTGATGA ATTTCAGTTTCGGCTGGAGCTTAATATTGTTGGCCTTCATCGGCAGGTTCAGGGTGGCATAGATTATATGAATCACGACGGTAAGATCCTTGCCACAAGT GTTGTTGCGTCAGGGGGCCATGCTGATGAGTTAGATAATCCGGATGTCTTGATATATACAGGACAGGGTGGCAATTTGGTGAACTCTGATAAAGAACCCG AAGATCAGAAGCTTAAGCGAGGCAATCTTGCTTTAAAGAACAGCAGTGAGGAAAAGAATCCTGTTAGGGTGATTCGTGGCTCTGAATCAACAGATGGAAA GCTAAGGAGATATGTTTATGATGGACAGTATGTAGTTGACAAATATTGGCAAGATATGGGACCACATGGTAAGCTGATTTTTAGGTTTCTGCTGCAAAGA ATCCCAGGTCAGCCAGAGCTTGCATGGAAGGAAGTGGAAAAATCTAAAAAAATAAAGTTAAGAGAGGGTCTACGTGTTAATGATATTTCTCATGGGAAAG AGCGAATTCCGATATGTGCTGTGAACACCATAGATAATGAAAAGCCTCCTCCATTTAAATACATTACTAGAATGATATATCCTAATTGGTGCAATCCTAT TCCTCCGGAAGGATGTGACTGTATTGACGGATGCTTCGACAAAGAGAAATGTGCTTGTGCAGCGAAAAATGGGGGAGATATCCCATTCAATCACAATGGA GCTATTGTAGAAGCAAAGTCTTTAGTCTATGAGTGTGGACCTTCTTGCAAATGCACCTCATGCTACAATAGAGTCAGCCAACTGGGCATAAAGCTTCAGC TTGAAATTTTTAAAACCGAGAAAAGAGGGTGGGGAGTGAGATCTATAAACTTCATCTCTTCAGGAACTTTTATTTGTGAATACACAGGAGAGCTTCTTGA AGAGAAAGATGCTGAACAAAGAACTGGCTCTGATGAGTATCTTTTTGATATTGGGAATAACTACAACAATCATACTTCTTCAGATGGGGCTTTGGCTGTT ATACAACAGGATACACAGTCGGCTTCTTTCGAAGTTGTGGAGGGCAACAGCTTCACCATTGATGCAGCCGAGTATGGTAATCTGGGGAGATTCATCAACC ATAGTTGCTCTCCTAATCTCTATGCTCAAAATGTCCTGTACGATCACAATGACGACAGGATTCCTCACATAATGCTCTTCGCTGCTGACAACATTCCTCC CTTTCAAGAGCTAACCTATGATTACAATTACAAGATAGACCAAGTCTTTGATTCTGATGGAAAAATAAAAAGGAAGAATTGCTACTGTGGTTCTGTGGAG TGCACTGGTAGGATGTATTGAGACTTGACAAAGATTGTGGTTGTTGCTTATGGTGACTACTCTAATAGTAAAGCAGAAATTATGAAAAACATGTTATCTC ATCTGGAAAAGGAAAATGTTTTTACTAGAGTAATGCAATATGAAGATTTGTCTAATGGTGCAAGTGGTTCAGACAGTAGTCTAAACTCTGAAGTCTCTTT TCACACTTTCTCTCTCTCTTAAATTCTGTTTTCAATCTTCCTTTATTGTTTAGAGTGGAATTTGTACCTTTCATATGGTACTATCTAGCATAACTCTTTT TACTATATGCTTATTTTATTCCTTGGATTATGCCAACCATGTCTATAGATTTAGGGTAGTTTGTATACACCTAGTTCAGGAGCCTTTTATCCTTTCAAAT GAGAATGAACACATGCATCGTTTTCTTTCAGTCCATAACAAGAGAAGTCAGGCTGTCGCACTTTTTTTTGTACTAACAAGAATAATTATCCTTTCCAACA AGTGTCGCTTCTAGTAATTGAATGCGCTGACCTTTTGGTTATTCTAGGAATCTAGCGGATCATTACACCACTAGATCAACGTCTTGAGTAATTTGTATGT ATCTGACTCTGATATTAAGGGACAAATTGTTTATCTAAATTGTTTGAGTAATTTGTATGCACATAAACAATCTTTAAAATAGATAAT
• Tissue: pods
• Gene name: LI_gene_173636;
• Additional information: details;

Expression of Ll_transcript_456217

FPKM

• PAB: 0.5
• PNAB: 0
• PS1: 0.8
• PS2: 0
• PS3: 1.7
• PW1: 0
• PW2: 0.8
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456217

• Blastp: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 from Arabidopsis with 58.8% of identity
• Blastx: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 from Arabidopsis with 58.8% of identity
• Eggnog: Histone-lysine N-methyltransferase(COG2940)
• Kegg: Link to kegg annotations (AT2G35160)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422109.1)
• Pfam: SAD/SRA domain (PF02182.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;