Ll_transcript_456208

• Id Trinity: TRINITY_DN49969_c0_g1_i2
• Name Transcript: Ll_transcript_456208
• Sequence: ATTTTGAGAACAGTAATTTCTGTCATAAAAATGTCCCTTTAGTTATCATCTTCATTCTTCATATTCTCCATTCTCACTCTCTCTCCTTTCTTTCTGAATC CCAACATTTCCACTGATCAAAACTTCAAAAACTCAAATCACAAAAACCTTATCCAATTTACCTTATTTGAAGATTTTGTCCAAGTTTGATTTCTGATTTC TGTCATCGTAAGCCTCTCATTTTGCATCACAATCAAGAGCGGAAACTAGAGTGCAGGACATTAGTTGGCAAAGCTTTTCTTTATTATTCAATAGGAATGG CAGCATCAGTCAATATTGGTAATTCTGAAGAATTATCTGGGAAGCGATCATTGGAAAATGGGGACTGCACTTCTCTTACTCGGTCCATGTATAAGCGGCG TAAAGTTTCTGCCATTCGAGATTTCCCAGAGGGATGTGGACCATTGGCTTTAAGTGTTGTTCCAGTGTTACAGGTAGATATTGGTGATATTAGTTCCGCT AATGGTACAATTGTTGAGGATAAGAATGGTGAATATTCAGGGGATGATACTGTTAGAACGTCCAACTGCAAAGCTGATTCTCAGCATTCTGAGTTAAAAA AAGATTCATATCTTACCGAGTCTGTTCGTGAAACAATTGATTGTAGTTTGAAGAATGAAAATCTAATGGTCCCATCTCATCATGTAGATGGGCTTAGTTT GGCAAATGATGATTCTGCAGAAGAGCCAATGGTGGGCAAGGAAGCTTTGAAGGATAAAGGGTTGACTCTTGGCCAAACAACTGACTGTAGTCTGAAGAAC GAAAATCCAGCAATCTCATCTCATCATATGGATGTTCTTCCTTTGGCAAATGATGTTCCTGCAAAAGTTTCGTTGGTTGGCATGGAAGCTTTGGAGGATA CAGGGTTGACAGGAATTGGGAACTTTGTAAAATGTGAGTCCTCTATGCCAAAGTCATCATCTCCAGTGGGTGAGGTGGCTTTATCAAGTGGTTCAAAATC CTTATTCAAGGCCAATGCATCTGGTTCTAGTGCTTCTATTGAGAAGGCTATGACTAGAAGGTATGCTCCTAAAAGAAAACTTTCAGCTGTCAGAGACTTC CCCCCTTTATGCGGACGCAATGCTCCTCGTCTCAGCAAGGATGGACATCTAATGGAGATCTCTTTGAACAACAAGATACTGAGTCAACAGAACTTGGCTG TAGATGACAATCCATTGAAAAAAATATCTGCTACTGATGTGCAGGAGAAGGACAATAACATTCAGGATGAAAATGCGTGCAAGAGAAAGCTTGTGGATGT AGCTAAAGCTGATCGTGAAAGGATTGCTACAAAGAAAGTGAAGATGGATGCATTTGAACTACCTCAAGAAAGTAATCATCAAGTTGAAATATATTCCAAG GCAGTTGTCAAAGAGGAAAATAAGGATGCTGTACAGGACCTACAGGCTGAGGGAACGTCAGGGCTAGCGATTATTGTTTTCCCAGAATTCCAAGGTCCTG AGGCAAAGCCTATGGATATGTCTACGTGTCAGTATAATTTGAAAGGAGATTTTAGTGGATTGCAGGATTCACCAGACAGGAAAGTGGCGCTAGGTTTGAT GTCTAAATCAGAATGTCCTCGGAGGTCTGACAAAGCTTCTTCCAAATCTAAAATGCTTGGTGTTAAAAACGGAAGGAAGGGAGTGAAAGCTGGTTGTTTT GCACACCTTGACAGGTCTAAAGCTGCTCTGAAGAGTAATGATGCACCAAGTCATTCTGGGAAGAAGCCATTGAAAAAGGAAAGAGAAAATGCTGCTTCTG GCTTACAATTAGTAGTTTTTGGAAACAAGGATTCTCTTGGCTCTGATGAAAACATCGAAGACTTTCACGTTGTCCCCAAATCACATTGTTTCAATGTAAA TGTTCCCCCCTTTGGTCATGGTAAATTTGGTGGTCATGAGAATGACTCAACCGTGACACGAAATAAAGTGCGGGAAACATTACGCTTGTTTCAAGTTGTT TCTAGAAAGCTTTTGCAGCAACTAGAAGGTAAGTCAAAAGAGCAAGCAAATGTTTCTAAGAGAATTGACTTACAAGCAGCAAAGATCCTTAAGGAGAAAG GGAAATATGTTAACATAGGCAAGCAAATCTTGGGATGTGTCCCTGGGGTTGAAGTTGGTGATGAATTTCAGTATAGAGTGGAGCTTAATATGATTGGCCT TCATCGCCCAATTCAGGGTGGTATAGATTATGTGAAGCACGATGGTAAGATCCTTGCAACTAGTATTGTTGCATCAGGGGGTTATGCTGATGAGCTGGAT AATTCGGATGTCTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCACTGCTAAACAACCTGAAGATCAGAAGCTTGAGCGGGGAAATCTTGCTTTGA AGAACAGTAGTGAGGAAAAGAATCCTGTTAGGGTGATACGTGGCTATGAATCGACAGATGGAAGGCCCAAGACATTGGTTTATGATGGACTATATCTGGT TGAATCGTGTTGGCAGGATATGGGGCCACATGGGAAGCTGGTTTATAAGTTTCGCCTGCGAAGAATCCCAGGTCAACATGAGCTTCCTTTGAAGGAAGTG AAGAAATCTAAAAAGTTCAAAACAAGGGAAGGTCTATGTGTTGATGATATTTCTCATGGGAAAGAGCGGATTCCAGTCTGTGCTGTGAACACTGTAGATG ATGAGAAACCCCCGCCATTTATATACATAACTAGCATGATATATCCGTATGGCAATCTCACTCTTCCTGAAGGATGTGATTGTACTAATGGATGCTCTGA CTTGAATAAATGTTCTTGTGTAGTAAACAATGGGGGAGAGATCCCATTCAATCATAATGGTGCTATTGTAGAAGCAAAGCCTCTAGTCTATGAGTGTGGA CCATCTTGCAAGTGCCCTTCGACATGCCATAACAGAGTCAGTCAACTCGGCATAAAGTTTCAACTTGAAATTTTTAAAACCAGTACAAGGGGATGGGGCG TGAGATCCCTAAATTCCATTCCTTCAGGAAGTTTTATCTGCGAGTACATAGGAGAACTTCTTGAAGACAAGGAAGCTGAACAAAGAACTAGTAATGATGA GTATCTTTTTGATATTGGAAATAACTTCACCAACAGTACTCTCTGGGATGGACTTTCCACACTTATGCCTGATGCACAGTCAAGTTCTCTTGAAGTTGTG AAGGATGGCGGCTTCACGATTGATGCTGCCGAGTATGGCAATGTGGGTAGATTCATCAACCATAGTTGCTCACCTAATCTTTATGCCCAGAATGTTCTTT ATGATCATGATGACAACAGTATGCCTCATATAATGTTTTTTGCTGCTGAGAACATTCCTCCACTGCAAGAGCTGACTTATGATTACAACTACAAGATTGA TCAAGTCTTTGATTCTGATGGCAATATAAAAAGGAAAGATTGCTATTGTGGCTCTGTTGAATGTAGTGGTAGGATGTATTAGTGAGGTAGTCATTGGAGA AGGGTGTTTTTTTTGCCTTCTAATTTTAACTTGCCTTTTTGGTTTACTTTTCTTAGACTGCAAGGCTCTAACTCTGTTAGAGATTTGATGGTGAAATAAG GAAATGAGGTAATGTGAAAGAGTGAAAAATATATATGAAAGAGTGTGAGATGAAGAATATGGATTTGAAGGAAAATTGGGTAAGGGAGATATGGATAAGG ATGCTTTTGGGATTTTGAATTTTTTTGGAGTTTAAAACTATTATTTTGAGTTCAAATTTAAATTCCATTTTTTTTCATTCTATTGAGCCACA
• Tissue: pods
• Gene name: LI_gene_173636;
• Additional information: details;

Expression of Ll_transcript_456208

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 0.6
• PS3: 0
• PW1: 0.1
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456208

• Blastp: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 from Arabidopsis with 61.43% of identity
• Blastx: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 from Arabidopsis with 62.52% of identity
• Eggnog: Histone-lysine N-methyltransferase(COG2940)
• Kegg: Link to kegg annotations (AT2G35160)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423938.1)
• Pfam: SAD/SRA domain (PF02182.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;