Id Trinity | TRINITY_DN49969_c0_g1_i3 |
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Name Transcript | Ll_transcript_456209 |
Sequence | GTGCTATCTGCACCCTTCCAAAAAAGGTACGAAAAATAGCTTCCGGAAACATGTTTCTGAAATTGTTAGAAAAATATTTTGGAACACTTCCAAAATGTTT GCGGAAGTGTGCTGGTGAAAAATAAAGGGTGCAAATAGCACCACCATATATTTTGATATTATATCTGAAGAACCTAGTCAAACTCCACCTGAAAGTTAGC TCATGGGGGTATGGCTGCCAAGTTATTGTAAATGGTTTTTCCTTTGCAGAGAAGAAAAGAGTGTAGGCTCAATAGTTGGTAAAGCTGAATTCAGAAACTT CACAAAAAATGGTTACATCATTAAGTAATGGTCATTCCAAGGAAAAATTTAAGAAGCCACTGGTGGAAAATGGGGATTGCACTTTTCTTGTTCTGCCCAA ATATAAGCGGCGAAAAGTTTCAGTAATTCGTGATTTCCCAGAAGGATGTGGCTTGTTTGGTTCAAAGATCCATCCTAAAACCATTTTCCAAACATTCGAC CTTAGTTTGATGAAGGAAGATCCGGTGGTCTCATCTCATATGCATGCACCACCTCCTTTGGCAAACGATGAACCTGCTAATCAGCAGTTGGTGGGCGTGG AAGCAGCTTTGGAAGATACAGAGTTGACAAGAACTCCAAAAGCTGTAAAATGTGGTTCCATCAGTATGTTGAATTCGCCTCCTACAGTGGACGAGGTGGC GTTTGTAGGTAGTTCAAAATTCTTATCATCTGATTTGTCCATTTCTTGTTTGAAGAAGGCTGTAACTACAAGGTCTTTTCCTCGAAGAAAAGTTTCAGCT GTCAGATACTTTCCTCCGTTGTGTGGCAAAAATGCTTCACGTCTCAGGATTGACAGTGAATGTCTAAATGGGATCTCTTCTTTGGAGAACACGAGTAATG GTCTACAGAACATGGTTGTAGATGACAAGCCATTGGAAAAGGTAACAACAACTGATGCAAAGGAAGTAATGGCCATAGTTCAAGCTGAAAATCAAGGGGA TGATGCTACTACAAATGTGAAGATACTTGATGTCTTTGAACCTTCTTCTATGGTGCAATTGCCACCGGAAAGCATAAGAGAAAGGTGCATTACGATTATT GGAGAAAGCAGTCATCACCAGGTTGAAATAAATTCCAAGGCAGAAGATATAGAGAGAAATGGAGATGCTGTTCAGTTTGAGGGAACGTCAGGGAAAGCTA TTATAGTTCTCCCTGAATGCCAAAGTCATGAGACAAAGCCTTCAGAAATGCCTAATTGTCGACATGAGCCAAAAGGAGGTTTTGATGGATTGCAGGTTCA TCACCAGGTTGAAATAAATTCCAAGGCAGAAGATATAGATGGAAATGGAGATGCTGTACAGTTTGAGGGTACATCAGGGAAAGAGATTTTAGTTCCCCTT GAATTCCAAAGTCATGAGACAAAGCCTTCAGAAATGCCTAATTGTAGTCATGCGCCAAAAGGAGGTTTGGATGGATTGCAGGTTGTACCTACCAAGACAG TAGTGCTGGGTCTGATGGCTGAATCTGAATGTCCTCAGAGGCATGGTAAAGATTCCTCCAGATTTGATTTGATTGATGGTACAAATCAGAGCAAGCGAAA GAAAGTTGGTATTTTTGCACAGCATGACATGTCAAAAGCTGAGAAGAGAAAGGAGTCACCAAATCATGCTGGGAAGAAGCCTTCACAAAAGAAAAAGCAA AATGCTGCTTCTGAAGGTTCAGGTCAATTGGTAAGTTGGGAAAATAACGATTCTCATTATTCTAATGAAGAAATTGCAGAATTTCGGGTCAACGAGAAAT CACATGGTGCAAGTGTACAAGTTCCTCCTATTAGTCATCATAAAAATGACTCAAATGTGACCCGCAATAAAGTGAGGGAAACGTTGCGTTATTTCCATGC TGTTTATAGAAAGCTTTTGCATGAAGATGAATCAAAGATAAAAAAGCAAACAGATGGTCCTAGAACTTTCCATACACAAGCAGCTAAGATCCTTAAGGAG CAAGGGAGATATATTAACACAGGCAAACAGATCTTGGGATCTGTCCCTGGAGTTGAAGTTGGTGATGAATTTCAGTTTCGGCTGGAGCTTAATATTGTTG GCCTTCATCGGCAGGTTCAGGGTGGCATAGATTATATGAATCACGACGGTAAGATCCTTGCCACAAGTGTTGTTGCGTCAGGGGGCCATGCTGATGAGTT AGATAATCCGGATGTCTTGATATATACAGGACAGGGTGGCAATTTGGTGAACTCTGATAAAGAACCCGAAGATCAGAAGCTTAAGCGAGGCAATCTTGCT TTAAAGAACAGCAGTGAGGAAAAGAATCCTGTTAGGGTGATTCGTGGCTCTGAATCAACAGATGGAAAGCTAAGGAGATATGTTTATGATGGACAGTATG TAGTTGACAAATATTGGCAAGATATGGGACCACATGGTAAGCTGATTTTTAGGTTTCTGCTGCAAAGAATCCCAGGTCAGCCAGAGCTTGCATGGAAGGA AGTGGAAAAATCTAAAAAAATAAAGTTAAGAGAGGGTCTACGTGTTAATGATATTTCTCATGGGAAAGAGCGAATTCCGATATGTGCTGTGAACACCATA GATAATGAAAAGCCTCCTCCATTTAAATACATTACTAGAATGATATATCCTAATTGGTGCAATCCTATTCCTCCGGAAGGATGTGACTGTATTGACGGAT GCTTCGACAAAGAGAAATGTGCTTGTGCAGCGAAAAATGGGGGAGATATCCCATTCAATCACAATGGAGCTATTGTAGAAGCAAAGTCTTTAGTCTATGA GTGTGGACCTTCTTGCAAATGCACCTCATGCTACAATAGAGTCAGCCAACTGGGCATAAAGCTTCAGCTTGAAATTTTTAAAACCGAGAAAAGAGGGTGG GGAGTGAGATCTATAAACTTCATCTCTTCAGGAACTTTTATTTGTGAATACACAGGAGAGCTTCTTGAAGAGAAAGATGCTGAACAAAGAACTGGCTCTG ATGAGTATCTTTTTGATATTGGGAATAACTACAACAATCATACTTCTTCAGATGGGGCTTTGGCTGTTATACAACAGGATACACAGTCGGCTTCTTTCGA AGTTGTGGAGGGCAACAGCTTCACCATTGATGCAGCCGAGTATGGTAATCTGGGGAGATTCATCAACCATAGTTGCTCTCCTAATCTCTATGCTCAAAAT GTCCTGTACGATCACAATGACGACAGGATTCCTCACATAATGCTCTTCGCTGCTGACAACATTCCTCCCTTTCAAGAGCTAACCTATGATTACAATTACA AGATAGACCAAGTCTTTGATTCTGATGGAAAAATAAAAAGGAAGAATTGCTACTGTGGTTCTGTGGAGTGCACTGGTAGGATGTATTGAGACTTGACAAA GATTGTGGTTGTTGCTTATGGTGACTACTCTAATAGTAAAGCAGAAATTATGAAAAACATGTTATCTCATCTGGAAAAGGAAAATGTTTTTACTAGAGTA ATGCAATATGAAGATTTGTCTAATGGTGCAAGTGGTTCAGACAGTAGTCTAAACTCTGAAGTCTCTTTTCACACTTTCTCTCTCTCTTAAATTCTGTTTT CAATCTTCCTTTATTGTTTAGAGTGGAATTTGTACCTTTCATATGGTACTATCTAGCATAACTCTTTTTACTATATGCTTATTTTATTCCTTGGATTATG CCAACCATGTCTATAGATTTAGGGTAGTTTGTATACACCTAGTTCAGGAGCCTTTTATCCTTTCAAATGAGAATGAACACATGCATCGTTTTCTTTCAGT CCATAACAAGAGAAGTCAGGCTGTCGCACTTTTTTTTGTACTAACAAGAATAATTATCCTTTCCAACAAGTGTCGCTTCTAGTAATTGAATGCGCTGACC TTTTGGTTATTCTAGGAATCTAGCGGATCATTACACCACTAGATCAACGTCTTGAGTAATTTGTATGTATCTGACTCTGATATTAAGGGACAAATTGTTT ATCTAAATTGTTTGAGTAATTTGTATGCACATAAACAATCTTTAAAATAGATAAT BLAST |
Tissue | pods |
Gene name | LI_gene_173636; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_456209
Blastp | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 from Arabidopsis with 58.8% of identity |
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Blastx | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 from Arabidopsis with 58.8% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT2G35160) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422109.1) |
Pfam | SAD/SRA domain (PF02182.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |