Id Trinity | TRINITY_DN49970_c0_g1_i4 |
---|---|
Name Transcript | Ll_transcript_458577 |
Sequence | TCATGCATGTTGCAAAAGTGCAACTTGGAATGTTTTTCACTTTGTCAATGAATATTCACTACTTGACCCTCTTGCCATGTTTCAAATTTCAAAACCAACG GTTCAATTTTCTCATTAAGGAAAGTTCTAACGTACGAAATCAAAGCCATTGAATTATCAAACCACAATATTTCATCATCAATTATCACCACCACTATCTA AAAAACATAACATTCCAAGTTCTTAATTTGATGATCAATTGAAACACCCTTTTGGCTTCTTGTTCTTTTGACATTACAGGTGTTTCTCAAACATCACTGA GCTCTCACTTTTCGGCCATGGCGGGGGATCATGATTCTCATGGTGGCAGCCCAAGTTATGGATTTTGTGGGAAAAATGGAAGCTTTGAAGGGAGTAGCAT GCAATTTGATGACCCAGTTTTGAAAAATATGGTTGATGATGGTAGGTCCATGTTGGGGTATTCTTTGACTTGTCCAGATTTAGTAATCTGTGATGTCTCA CCAGATGTTGATGAAATCAGCTATGCTGGTGATTCCACTGAATTGTTGGATGGAAAATATTGCAAGAATTTGGAATCATCTATGGAACTTTCTCTAGAGA ATGGAATCAATGAGTCTGAAGTTGAAGTTGGCAATGTCCATAAGACCCAAACTGTTAAATTCTCTAATTTGTGTCAGATTTTTGAACAAGAGGAAGAGGT GCTATTCCCTGGAGCCTCCTTTGAGCTTCCTCTACCACCGGTAACCAAGGATGAGTTACTTCCGGACGACCCTCATAGAGAAGATGAAATGCTACAAGAT TTGAGAGTGTATGAGGTGGCAGCATCAGTGTCCTCAGAAGATAATGACCATGTTCGGGTGGAAGACAAGTTTCAGAAGCTGAAAAGAGATTTTGATTGTC AGAGAAAGAAGCTGGTAGAAACAATGCAAGAGTTGAGGGAGGTTAAGAGGAAGAATCAACAGAAAAGTAAAGAATGCCAAGAAGCTTGGAACTCCTTGAA AGAGCTTCAGAATGAGCTTATGCGCAAGTCCATGCATGTAGGATCTTTAGCATTCGCCGTTGAGGGGCAAGTGAAAGAGAAAAGTAGGTGGTTTTCATCA CTGAGAGATATGACAAGGAAATTGAAGATTATGCAAATGGAACACATCAAGTTGTTAGAGGAAGCAAATGCATACAAGAAATGTCAAGCAAATCATATGA GAGAAATGGAGATTATTATTATGTCTAAAATGAATGAAGAACTAAAGACACATGAAGATCTCAAGTTCAAATACATTGAAGGGGCTAAGGAACGCAAAGA GCTTTACAATAAGGTTTTGGAGTTGAGAGGAAACATAAGAGTCTTTTGCCGATGTAGGCCTCTCAACGCTGAAGAGTTAACAACAGGAGCCTCAATGACC ATAGATTTTGAATCTGCTAAAGATGGTGAGCTTACTGTAATGTCAAATGCAGCTCCTAGAAAGAGTTTCAAGTTTGATGCTATCTTTAGTCCCCAAGCTG AACAAGCTGATATTTTTGAAGACACGGCTCCATTTGCAACCTCAGTTCTAGATGGGTACAATGTATGCATTTTTGCATATGGCCAGACCGGGACTGGAAA AACATTCACAATGGAGGGCACAGAAGTGGCTCGTGGAGTCAATTTCAGGACACTTGAGAAAATGTTTGACATAATCAATGAGAGGGAGACAGTTTATCGC TACGATGTTTATGTCAGTGTCTTAGAAGTGTATAATGAGCAACTAAGAGATTTGCTGGTTCCAGGGAACCATCCAGGAATGGCTGCAAGAAGACTTGAAA TAAGGCAAGATGGTGAAGGAATGCATCATGTTCCAGGTTTGGTAGAAGCACATGTGAACAATATGACAGAAGTCTGGGAAGTCCTACAAACTGGTAGCAA TGCAAGAGCTGTAAGCTCGACCAATGCCAATGAGCATAGTAGCCGATCCCACTGCATTCATTGCGTTATGGTTAAGGGAGAGAATTTGTTGAACGGGGAA TGCACAAGAAGCAAGTTATGGCTGGTGGACCTAGCAGGCAGTGAGCGAGTGGCGAAGACAGAAGTACAAGGCGATCGGCTAAAGGAGACACAAAATATTA ACAGGTCTCTGTCTGCACTTGGAGACGTCATTTCAGCCCTAGCAATAAGAAGTTCTCACATCCCTTTCAGGAACTCCAAGCTTACACACTTGCTGCAAGA CTCATTAGGAGGAGATTCGAAGACACTTATGTTTGTACAGATCAGTCCTAATGAAAATGATTTGAGTGAAACAATTTGCTCTCTGAACTTTGCTAGTAGA GTAATGGGAATAGAACTGTGTCCTGCAAAAAAGCAGTTGGATACTGTTGAACTTATGAAACACAAACAGATGGTATGATTACTGTAGTGCTGTCGTATTA TCGAGATTTCGGTGCTTAACCGTGATAGTCTATTTGATTTTCTATATGTTAACTCTACTATGTTAGGCTGAGAAAACAAAACAAGAGGTAAAAGTGAAGG ACATGAGAATCCTAATGATGGAGGAAATGATCCATGGATTAGAGTCCAAAATGAAGGAAAGAGATAACAAAAACAAAAGTCTGCAAGACAAGGTCAAGGA ACTGGAATCACAACTAATGATCGAGAGAAAGCTAGCTCGTCAACACGTAGACTCAAAAATAGCCGAACAGCATCAAATGCAACATCAAGAAGAGCAAAAT AATGCACTCGTGATGAGACCCACACTTGTAAATCGACCCCTCGGAAGTCAGAAGAATCTAAATGATCCTGTGAGTGCTGGTTGGTGCAAACCTTCAATAC CCTTTTCGGCAATGGAAAGCTCCATCAAGTACATTGATCATGCTGAAAAAGAAAACAATCCCGAGATAGCCGAAAGAGTCTTTCTACCAAAAAGGAATGG AAGAGCTTCTATGTGTCCAACAATGACACCGCGTGTTCCTTTAGCCATTTCTGCTTCAAGGCGCAACTCTCTCATTCCACTACCAAGTGTACCTAGCTTA ACAAAGCTACCACCACCATTATTCTCAAAGTTAACAAACCAAGCTGACCAGAAAGATATCAAAAATTGTACATCGAAAACCAATATTTTGCAGCCTGCAC AGGCTCATTGTGAAAGTCCAGAAGAAGCAAGAAGTGGTGTTAAGAAGAGCATAATAAGAAGAAGCCTACATAAGAAAATACAGGTAAATTCTCCAATGCA GCAACACATAATGAGAAGGGTTGGTGTAAATGTAGGCATGGAGAAAGTTAGAGTCTCCATTGGAAGTAGAGGGAGAATGGCACAAAGAGTGCAAGTAGGA AGTGGTAGAAGAGGTGTAGTTAAAGAAGTTCAACAAAAGAATATCCAAAAGGAAAAGGAAAGAGGATGGGTTTGAAAAGTTGGGTTCATCTATGTTATAT TTTTTATATGATGTGTGTTGATAGATAACATTTATTTCTTGTGTCTCTCCCTTCCAATGGACATGAAAAATGATGTATTTTTCATATGGAATATGCTAAA TAGTACAAAGCTCATGTCTTATATTACTAGTCGATATTTTTCACCAACGGGTGTTAGTTCAAGTGGTACATGTTTGATTCCCCTTAAGCAAGGACTCGGG TTTGAGTCTTGTGGATGAAAAGAA BLAST |
Tissue | pods |
Gene name | LI_gene_173638; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_458577
Blastp | Kinesin-like protein KIN-14Q from Arabidopsis with 71.57% of identity |
---|---|
Blastx | Kinesin-like protein KIN-14Q from Arabidopsis with 71.57% of identity |
Eggnog | Kinesin family member(COG5059) |
Kegg | Link to kegg annotations (AT1G72250) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443767.1) |
Pfam | CP12 domain (PF02672.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |