| Id Trinity | TRINITY_DN49980_c0_g11_i1 |
|---|---|
| Name Transcript | Ll_transcript_457265 |
| Sequence | CTTTTGTTCCTTCTCACAGGGACAGTATCTTTCACTCACATCCTACCAAAAACTTTCTAAGACACAAAAACAAACCACAGTAGTGTGTGGTTTCATTATT CCAAAACAAATTCAATGGCTTCTTCTTCAGACACCGTTTCTCGTTCATCTAGTTCTGCGGCAGACTCCTACATTGGCTGTTTGATAAGCTTAACCTCAAA AAGTGAGATCAGATATGAAGGTGTTCTTTATAACATCAACACCGATGAATCAAGTATTGGTCTCCGTAATGTGAGATCTTTTGGAACTGAAGGAAGGAAA AAGGATGGTCCGCAAATTCCTCCAGGTGACAAGATTTATGAGTATATACTGTTCCGCGGGACTGACATCAAGGACTTACAGGTTAAATCTTCTCCAGCTG TCCATCCTACGCCATCAGCGAACACTGATCCAGCTATTATTCAGTCTCAGTATTCTCGCTCAGTTACCACAACCACAAGCTTACCATCTTTAAGTGGTCC CTTGACCGGTCCTGGTTCTCATTCCTCACAACTTGGACTCCCTGTGTCAAATTTTCCAGCACCCTTGCCTTTGTATCAACCTGGACGGTCATGGGGAGCT TCTCCGCCCGCCCCGAATGCAAATGATGGTGGGCTTGCCATGCCAATGTATTGGCAAGGATATTATGGTGCCCCATATGGGCTTCCTCAGTTACAGCAGC AATCTTTGCTTCGACCACCACATGACTTACCGATGCCTTCATCTATGCAGCAATCAATGCAGTATCCCAATTTTAATTCCTCTTTACCTAATGGACCTTC ACATTTACCAGATATCCCATCATCTTTACTCCCTGTCAGTACTATTTCTCATAGTGTATCTACTTCTATGCCACCGTCAAATCTTCCAATAACGTTGACT CCAGCACCTTCTGCTACTTTAGCTCCTGAAACTTTGCCAGTATCAGAACCAAACAAAGCACCAACTGTTTCGTTTTCAGCAGTGTCACTACCTGCTAACT TACCATCGTTGACTCCTTTCTCCAATGATAGTCTCGATATAGGTGCTGTACTTCCATCAGTCAACAAATCTGCTGCAATTTCAGGTTCAAGTTTGCCTTA TCAGACTGTACCCCAGACGACTCCTGCAATTGTTGGATCATCAAACTCCATCCGTACAGAAACATCAGCCCCTTCTCTGGTAACCCCAGGTCAATTATTG CAGTCTAGACCAGCTGTAGCATCTTCATCTCAGCCTTTACAAACATCTCATAAGGATGTTGAAGTGATTCAGGTATCAGCAACATTACGTCCAGAGGCAT CTGTGCCAGTTTCTGCTGAAACCCAGCCACCAATACTACAATTGCCAGTAAATTCACGGCCCAGCCATAGGCCTGGTGGAGCTCCTACCCAAACTCATCA TGGCTATGGCTATAGGGGACGTGGAAGAGGAAGAGGAGTCCAGGGTATTTGCCCAGTTGTAAGATTCGCTGAAGATTTCGATTTCATGGCAATGAATGAG AAGTTCAACAAAGATGAAGTGTGGGGTCATCTGGGTAAAAGCAAACAACCAAACGAGAAAGATGGGGAAGAAATTGCCAGTGATGAATATGGCAGTGAAG ATGAGGGTGGTGGTCATGTATCAAAATTGGATGCTAAGCCTGTGTATAGAAAGGATGATTTCTTTGACTCACTTTCTTCCAACACACTTGACCGTGATTC GCAAAATGGAAGAATCAGATATTCCGAGCAAATTAAGATCGATACTGAGACTTTTGGTGAATTTTCAAGGCACCGTGGTGGTTGGGGAGGACGTGGTCAG TGGCGTGGTGGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_173722; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_457265
| Blastp | Protein decapping 5 from Arabidopsis with 54.09% of identity |
|---|---|
| Blastx | Protein decapping 5 from Arabidopsis with 52.68% of identity |
| Eggnog | LSM14A, SCD6 homolog A (S. cerevisiae)(ENOG41122RA) |
| Kegg | Link to kegg annotations (AT1G26110) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461657.1) |
| Pfam | Ataxin 2 SM domain (PF14438.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |