Id Trinity | TRINITY_DN49980_c0_g1_i8 |
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Name Transcript | Ll_transcript_457266 |
Sequence | TGCCTTTGTATCAACCTGGAGGGTCATGGGGAGCTTCTCTGCCTGCCCCAAATGCAAATGGTGGTGGGATAGCTATGCCGATGTATTGGCAAGGATATTA TGGTGCCCCAAATGGGCTTCCTCATTTGCATCAACAATCTTTGCTTCGACCACCTGGTTTGTCAATGCCTTCATCTATGCAACAGCCAATGCAGTATCCG AACTTTAGTCCATCTTTACCAACTGGGTCTTCAAATTTGCCTGAATTGCCATCATCATTGCTACCAGTCAGTACTATTGCCCATAGTGTAACATCTGCTT CTTTACCACCATCAGATGTATCTCCAGTACCTCCTTCTTTGGCAGCAGCCCCTTCTTCTTTTTCTGAAGCCCCTTCTGTGTTGCATCCTGCACCTTCTGC TTTGCCCCCGACACCTTCTACGTTGCCTCTTGCACCTTCTGGATCACTAGCTTCTGAAACTTTCCCAGTGCCATTGACAAACAAGGCACCAAATGTTTCA CTTCCAGCTGTCACACCAGCTGCTAACGTGTCGTCACTGACTCCTTTGACCAATTTTGGTTCAGAAATGAATGCTACAGTGCCACCAATCTTTAGCAAAG CTAATGCAACTTCAGGTTCAAGCTCGACATATCAAACTGTATCCCAGTTGCTCCCTTCAGTTGTTGGATCGTCAAATTCTATCCGTTCAGAAACACCAAC CCCTTCTCTAGTAACCCCAGGTCAATTATTGCAGCCTGGTCCAACCGTAGTTTCTACAGCTCATCCTTCACAGACACCTCATAAGGATGTTGAAGTGGTC CAGGTATCTTCAACATCATCTCCTCAGTCATCTCTGCCAGTTTCCGCTGAAAATCAACCACCAATACTACCATTGCCAGTAACTTCACGGTCCAGTCACA GGGTATTCACTGCCCATCATCCCGGTGGAGCTCCAATCCAATCTCATCATGGCTATGGCTACAGGGGACGTGGAAGAGGAAGAGGAAATGGGGTCTTGCG TCCGGTCACAAAATTCACTGAAGAGTTTGATTTCATGGCAATGAATGAGAAGTTCAAGAAGGATGAAGTTTGGGGTGATCTTGGTAAAAGCAATAAGTCT CATTTAAAAGAGAAAGATGGGGAAGAAAATTCCCTTGATGAAGATTACATTCAAGATGGAGACAATGATGATTCATCAAATTTTAAGCCTGTTTATAACA AGGATGATTTCTTTGACTCGCTCTCTTCCAATGCGCTTGATCGGGCTTCCCAAAACGGGAGGATAAGATATTCTGAACAAATCAAGATTGATACTGAGAC ATTTGGCGATTTTGCGAGGCACCGTGGTGGTAGAGGGGGTCGTGGTCCTTTCCGAGGTGGATACCCATCTAGAGGTGGTTATTATGGAAGGGGCTATGGC TATTCTGGAAGAGGAAGGGGACGCGGCATGCCGAGTCGCAGTTCTTAGATTGCAGTTTTATTATGCCCACACCCATCTCGCAGTTGTAAGGCAAACTTTG ATCAAAGCACCCAGAGTCTATGCACTGTTCTATAGCAACTTCCATTTAAGTACTATATTAATCTTAGTGATTGTGCTCTAATGTTGTGTTTTTTCTTCTG TTTATGTCTGTTTTACATTAATAAGTAGGACATTTTTCTGGCCATGTTGCCCTCTTGTTACTCCTTTACTAAGTGTACTAGGTTTGGTGGACATGTACAC CAATTATTTGTCTAATATCAATATGGCAGAAGGTTAAACTAATTTATTGCAGTAAATTGTTTTAAAAGATTTTAGGTCCATTTTCAGATTAAAAGTATGT ATGATTATTTTAAGGAAAAATTGTTTAGCGTATGCTACCCACCTTGAACATGTTTTTCTTAATTTGGTGGAGGAATACCTATGATTTTGAGGGGGGAAAT TAGTGTATTTGCTGTGTGGATGTCTGGATGAGAATGTCAAACAGATGAATATGATATATATGTATTCACAAGGTAAAGATTTACATAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_173720; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_457266
Blastp | Protein decapping 5 from Arabidopsis with 45.28% of identity |
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Blastx | Protein decapping 5 from Arabidopsis with 48.61% of identity |
Eggnog | LSM14A, SCD6 homolog A (S. cerevisiae)(ENOG41122RA) |
Kegg | Link to kegg annotations (AT1G26110) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455652.1) |
Pfam | FDF domain (PF09532.9) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |