| Id Trinity | TRINITY_DN49980_c0_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_457254 |
| Sequence | GAATAAGAATAGGATAAGAAGGGATGAATAAAGGAAGATTAAAGAGTAAAGTCTGAGAAGTGGAAACTGTTCTGAGGTGTCCTCTTAAGATTGGATTCAA CTGAAAGTAAAATAAATTACCCAAAAAAAGTATCAAATATATATTCCATCAGCAAAGGAGAGTATCAGAAACAAAAAAGGGTCAGAAGAGAACTCTCTCT TCCACCAAATCCCCAAAACCTAAACCCTAATCGATTGCCGGTTTGATCATGGCGTCAGACACCACTTCTAGATCCAATTCCGCTGCTGATTCTTACATTG GTAGCTTAATAAGCTTGACATCAAAAAGCGAGATCAGATACGAAGGTGTTCTCTACAATATCAACACCGAAGAATCCAGTATTGGGCTTAGAAACGTGCG ATCTTTTGGAACAGAAGGAAGGAAAAAGGACGGTCAGCAAATTCCTCCAGGTGACAAGGTTTATGAGTATATACTGTTTCGCGGATCTGACATCAAGGAT TTACAGGTAAAATCTTCACCACCTGTTCAGCCTACTCCACAAGTCAACAATGACCCAGCTATTATCCAGTCTCAATATGTTCGCCCAGCCACCACTTCTA CCAGTTTGCCTAACATTGCAAGTGGGTCTTTGGCTGATCTTAGTTCTCATGCCACACAAGTTGGACTCCCTGGCTCAAACTTTCAAGGGCCCTTGCCTTT GTATCAACCTGGAGGGAACATAGGGTCATGGGGAGCTTCTCCACCTGCCCCAAATGCAAATGGTGACGGGCTAGGTATGCCAATGTATTGGCAAGGGTAT TATGGTGCTCCAAATGGGCTTCCTAATTTTCACCAACAATCTTTGCTTCGACCACCTCCTGGTTTATTGATGCCTCCATCTATGCAGCACCCAATGCAGT ACCCAAATTTTAGTCTCTCTTTATCATCTGGATCTTCAAATTTACCTGAATTGCCATCATCATTACTACAAGTCAGTAATAGCACCTCTAGTGTCACATC TGCTTCTTTATCACCATCAAATTTGTATCCGGCACCTTCGTCTTTGCCAGAAGCCCCCTCTGCTTTGCCTGTGGCCCCTTCTGTGTTGCTTCCTGCACTT TCTGCTTTGCCCCCGACACCTTCTACTTTATCTCATGCACCTTCTGCATCACTAGCTTTTGAAACTTTTCCCCTGTCATTGACAGATAAGGCTCCAAATG TTTCACTTCCATCAGTCACACCAGCTGCTAACTTGCCATCACTGACTCCTTTGACCAATTCTGGTTCAGAAATGAATGCTACAGTGCCACCAATCTCCAG TAAACCTAATGCAATTTCAGGTTCAAGCTTGGCATTTCAAACTGTATCTCAGTTGTCCCCTTCAGTTGTTGGATCATCAAATTCTATCAGTACAGAAACA CCAGTCCCTTCTCTGGTAACTCCAGGTCAATTATTGCAGCCTGGTTCAACTGTGGTTTCTTCAGTTCACCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_173725; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_457254
| Blastp | Protein decapping 5 from Arabidopsis with 55.21% of identity |
|---|---|
| Blastx | Protein decapping 5 from Arabidopsis with 70.59% of identity |
| Eggnog | LSM14A, SCD6 homolog A (S. cerevisiae)(ENOG41122RA) |
| Kegg | Link to kegg annotations (AT1G26110) |
| CantataDB | Link to cantataDB annotations (CNT0001887) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461367.1) |
| Pfam | Ataxin 2 SM domain (PF14438.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |