Ll_transcript_456513

• Id Trinity: TRINITY_DN49988_c0_g1_i11
• Name Transcript: Ll_transcript_456513
• Sequence: AGCAGATTGGTGATACTATACCAAGTTTGTGTCGGAAGTTGACTAAATTATTGTACCCTCAATGTATTCAATGCTTGTGATCTTCTATTATAATATTCAT GGAGTAAGATTGAGGGGTACATGTTTCTTTGTATTGGTTACTCCCAGTGCTTCATTGTCATTCTCATATTTGGTTTCCTTAGTCTAAAGACCGTCACAAA GTTGTTATTTTTATATGATAGAGTCTCTTTGAAATTATTATGTGATTGTGTTACTCTCTTTAGCGTGCATTGTATTTTTGCCAGCCTGGGTGGCATTTCA ATATTTATATACTATGTGGAGCCATATTGTCATGGATATAGCATAATCGTTGCTTGGTTGTAATGTGTTCTGAGTTAAACTTACACTGTAAGGTTGAGTT ATGGTCCCTTGCTTCTTCATGAAGCCTTTACTGATTACGTGTACTTTATTTTGAAGTTCCTTTTGCTTTTAGCATGCACATGTAATGGTATAATTTTTTG CCGTTGTTGGATTGATACTTTATATGATTTATGTTATCATCATCAGAGACTGGTCTTTAAAGTTTTGGATTAATTTTATCTCAGTTCTTTTGCTGTATTA GGCTGGAGCATCTAATGTTGCCTAGTTTTTTTGCCATTAGATGAATAGGATTGTTCCATTTGTTCATGTTAATATATAAGTTCTATATCTATATTGCAGG GCTTGCTATGGTGTCTTGAGATTCGTCATGGAAAGTGGTGCCAAGGGTTGTGAGGTCATTGTGAGTGGTAAATTGAGGGCCCAGAGAGCCAAATCTATGA AGTTCAAGGATGGGTACATGATTTCCTCTGGGCAACCAGTCAAGGATTACATAGACTCTGCAGTAAGACATGTGCTCCTCAGACAGGGTGTTCTTGGTAT CAAGGTCAAGATTATGCTTGATTATGATCCTAAGGGGAAACAAGGTCCTAAAACTCCCCTCCCTGATATTGTCACAATTTACACTCCAAAAGAGGAGGAA GAATACATCAGACCGGCTGCCGTTGCTGTTATCGCTAGTGAGGTTGAAATCCCTGTGGCTTGAAATGTCTTGACTCTCCTGGATTGATATGTTTCTCTGG GATTTTCTGGTGTCTCGGTTCCTAGTTTTTCTTTTAAGCCACAGATCCTGTGTTGAAATTTTTTAGTTCATCAACTGGTTCAAATTTTGTTATAGCTATT CACAAGATTTTAGACATAAGTTATTGTAATATTTGTTTCTTTAACAGTTTGAAATGAGTTTCTTTTTTAATTGGTGTTTCTCGTTTTGGTTTTTCTCAGA ATAAATCAAATGCAGATACAATTTAAATCTTAA
• Tissue: pods
• Gene name: LI_gene_173788;
• Additional information: details;

Expression of Ll_transcript_456513

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0.4
• PS2: 0.1
• PS3: 0.3
• PW1: 0.2
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456513

• Blastp: 40S ribosomal protein S3-3 from Arabidopsis with 80.19% of identity
• Blastx: 40S ribosomal protein S3-3 from Arabidopsis with 86.54% of identity
• Eggnog: Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (By similarity)(COG0092)
• Kegg: Link to kegg annotations (AT5G35530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443157.1)
• Pfam: Ribosomal protein S3, C-terminal domain (PF00189.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;