Ll_transcript_456517

• Id Trinity: TRINITY_DN49988_c0_g1_i15
• Name Transcript: Ll_transcript_456517
• Sequence: GGCCCTTATATATAAATATAACCCCATTGTTGCAGAAATTAGGGTTTGCACTTTGCAGTCACAGCAATCGCAAGTGTGCGCTTAGATCTTTGTTTTTCCA ATTCGTCACAAAATGGCAACAACCCAATTGAGCAAGAAGAGAAAGTTCGTAGCTGATGGAGTTTTCTTCGCTGAACTGAATGAAGTTCTTACCAGGGAGC TTGCTGAGGATGGGTACTCTGGTGTTGAGGTTAGGGTTACGCCATTGCGCACTGAGATCATTATCAGAGCCACTCGCACTCAGGCCGTACTTGGTGAGAA GGGAAGAAGAATCAGAGAGCTTACATCAGTAGTGCAGAAGAGATTCAAGTTTGAAGAGAACACTGTGGAGCTATATGCCGAGAAGGTGAACAACCGTGGT CTTTGTGCTATTGCTCAAGCTGAATCTCTTCGCTACAAGCTTCTTGGTGGTCTCGCTGTTCGAAGGGCTTGCTATGGTGTCTTGAGATTCGTCATGGAAA GTGGTGCCAAGGGTTGTGAGGTCATTGTGAGTGGTAAATTGAGGGCCCAGAGAGCCAAATCTATGAAGTTCAAGGATGGGTACATGATTTCCTCTGGGCA ACCAGTCAAGGATTACATAGACTCTGCAGTAAGACATGTGCTCCTCAGACAGGGTGTTCTTGGTATCAAGGTCAAGATTATGCTTGATTATGATCCTAAG GGGAAACAAGGTCCTAAAACTCCCCTCCCTGATATTGTCACAATTTACACTCCAAAAGAGGAGGAAGAATACATCAGACCGGCTGCCGTTGCTGTTATCG CTAGTGAGGTTGAAATCCCTGTGGCTTGAAATGTCTTGACTCTCCTGGATTGATATGTTTCTCTGGGATTTTCTGGTGTCTCGGTTCCTAGTTTTTCTTT TAAGCCACAGATCCTGTGTTGAAATTTTTTAGTTCATCAACTGGTTCAAATTTTGTTATAGCTATTCACAAGATTTTAGACATAAGTTATTGTAATATTT GTTTCTTTAACAGTTTGAAATGAGTTTCTTTTTTAATTGGTGTTTCTCGTTTTGGTTTTTCTCAGAATAAATCAAATGCAGATACAATTTAAATCTTAA
• Tissue: pods
• Gene name: LI_gene_173788;
• Additional information: details;

Expression of Ll_transcript_456517

FPKM

• PAB: 2.5
• PNAB: 0
• PS1: 0
• PS2: 6.3
• PS3: 0.8
• PW1: 6.2
• PW2: 6
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456517

• Blastp: 40S ribosomal protein S3-3 from Arabidopsis with 86.52% of identity
• Blastx: 40S ribosomal protein S3-3 from Arabidopsis with 88.99% of identity
• Eggnog: Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (By similarity)(COG0092)
• Kegg: Link to kegg annotations (AT5G35530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443157.1)
• Pfam: KH domain (PF07650.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;