| Id Trinity | TRINITY_DN49988_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_456506 |
| Sequence | TCTGGTGTTGAGGTTAGGGTTACTCCTATGCGCACTGAGATTATTATCAGAGCCACTCGTACCCAAGCCGTTCTTGGTGAGAAGGGAAGGAGAATTAGGG AGCTGACCTCAGTGGTGCAGAAGAGGTTCAAGTTTGCAGAGAACACCGTCGAGCTTTATGCTGAGAAGGTGAACAACAGGGGTCTGTGTGCTATTGCCCA GGCCGAGTCTCTTCGTTACAAGCTACTTGGTGGCCTTGCTGTCCGGAGGGCCTGCTATGGTGTTTTGAGATTTGTCATGGAAAGTGGTGCTAAGGGATGT GAGGTCATTGTTAGTGGAAAGTTGAGGGCCCAGAGAGCCAAATCCATGAAGTTCAAGGATGGGTACATGATTTCATCCGGGCAACCAGTTAAGGATTACA TCGACTCTGCAGTTAGACACGTGCTCCTCAGACAGGGTGTTCTCGGTATTAAGGTTAAGATCATGCTTGACTATGATCCTAAAGGAAAGCAGGGTCCCAA AACTCCCCTCCCCGATATCGTCACAATCCACACACCAAAGGAGGAAGAAGAATACATTAGGCCTCCTCCTGCTGTTATTGCAAATGAAATTGAAGTCCCC GTGGCTGTGGCATGATGAAAATATTTTCACCTTCATCCCTGGAATAGTGGGTTTCATAGAACTTGAGTGCTAGTTGATTTTTGTATGTTTTCTTTGAAGT CCAAAGACTGCATTTAAATTTTTATAGTTTCTTATCTGTTTAAGAAACTTTTATACTTAAGTTTTAATTATAATCTGTTTCTTCTATTATTGTGGTTTAC TCATTCTCCTTTGTTAGGTTTTTTATTAAAATTGTTTGGGTTATTAAACCAAAAAATTGTGTTGAATAGTTGAAGTTCTGCGTCTCCCTGCCATGTTATC TGAAAACATAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_173788; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_456506
| Blastp | 40S ribosomal protein S3-3 from Arabidopsis with 87.5% of identity |
|---|---|
| Blastx | 40S ribosomal protein S3-3 from Arabidopsis with 87.5% of identity |
| Eggnog | Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (By similarity)(COG0092) |
| Kegg | Link to kegg annotations (AT5G35530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415109.1) |
| Pfam | KH domain (PF07650.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |