Ll_transcript_456510

• Id Trinity: TRINITY_DN49988_c0_g1_i9
• Name Transcript: Ll_transcript_456510
• Sequence: AAAAAAAGTACACATATGGAATTAAATATTGCAAGCAATCTCACACGTTGAACACAAAACCCTAAATTACCACGACCATTGGATCGTTCACAGCCATTCC ATATAGTCTCGTTCTCCACCAAAATCTTCACTCTGGAATTAGGGTTTGGAGAGGCACACATTCAACGCCACCTCTGGTGTTTCGATCCATTGACACCCTC TCATCCCTCAATCCCTATTCGCGACAATGAATACTCAGCTGAGTAAGAAGAGAAAGTTCGTAGCTGATGGAGTTTTCTTCGCTGAGCTGAATGAGGTTCT GACCAGAGAGCTTGCTGAGGATGGATACTCTGGTGTTGAGGTTAGGGTTACGCCATTGCGCACTGAGATCATTATCAGAGCCACTCGCACTCAGGCCGTA CTTGGTGAGAAGGGAAGAAGAATCAGAGAGCTTACATCAGTAGTGCAGAAGAGATTCAAGTTTGAAGAGAACACTGTGGAGCTATATGCCGAGAAGGTGA ACAACCGTGGTCTTTGTGCTATTGCTCAAGCTGAATCTCTTCGCTACAAGCTTCTTGGTGGTCTCGCTGTTCGAAGGGCTTGCTATGGTGTCTTGAGATT CGTCATGGAAAGTGGTGCCAAGGGTTGTGAGGTCATTGTGAGTGGTAAATTGAGGGCCCAGAGAGCCAAATCTATGAAGTTCAAGGATGGGTACATGATT TCCTCTGGGCAACCAGTCAAGGATTACATAGACTCTGCAGTAAGACATGTGCTCCTCAGACAGGGTGTTCTTGGTATCAAGGTCAAGATTATGCTTGATT ATGATCCTAAGGGGAAACAAGGTCCTAAAACTCCCCTCCCTGATATTGTCACAATTTACACTCCAAAAGAGGAGGAAGAATACATCAGACCGGCTGCCGT TGCTGTTATCGCTAGTGAGGTTGAAATCCCTGTGGCTTGAAATGTCTTGACTCTCCTGGATTGATATGTTTCTCTGGGATTTTCTGGTGTCTCGGTTCCT AGTTTTTCTTTTAAGCCACAGATCCTGTGTTGAAATTTTTTAGTTCATCAACTGGTTCAAATTTTGTTATAGCTATTCACAAGATTTTAGACATAAGTTA TTGTAATATTTGTTTCTTTAACAGTTTGAAATGAGTTTCTTTTTTAATTGGTGTTTCTCGTTTTGGTTTTTCTCAGAATAAATCAAATGCAGATACAATT TAAATCTTAA
• Tissue: pods
• Gene name: LI_gene_173788;
• Additional information: details;

Expression of Ll_transcript_456510

FPKM

• PAB: 9.4
• PNAB: 120.3
• PS1: 62.4
• PS2: 94.2
• PS3: 82
• PW1: 81.6
• PW2: 68.2
• PW3: 56.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456510

• Blastp: 40S ribosomal protein S3-3 from Arabidopsis with 86.21% of identity
• Blastx: 40S ribosomal protein S3-3 from Arabidopsis with 88.64% of identity
• Eggnog: Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (By similarity)(COG0092)
• Kegg: Link to kegg annotations (AT5G35530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443157.1)
• Pfam: KH domain (PF07650.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;