| Id Trinity | TRINITY_DN49991_c2_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_458390 |
| Sequence | GTTGGTCCCAACTCATTTCTATCTTTGATTCTGTTCTTCCCCAAAAACATTATTAGCCACATTGTCACCCTTTTTTGTGTGTAGAGGAGAGCTTTCTAGT GTATTCTCCTTATGTGATTCATCACCCCCATTGACGAACTCAGCGTGTGGAAGAGGAATGAACTGAGTAGGTGGGTCACCATGGAAATGTCGAAGTAATG AAACATGAAAGATCGAGTGTATTTTCGCCGTGGGTGGAAGAGAAAGAGCATAAGCCACAAACCCTATTTTCTTCAGAACCCGATAGGGACCAAAATATCG TGGACTTATCTTATGATACTCACGGCGAGCAACGGTTTGTTGTCTGTACGGTTGGAGTTTTAAGAGAACCCAATCTCCCTCCGAAAAGGAAACAAGAAAG AGGATGCATATTGTTTGAGGGTCGGAGGAGGACGCCCACATAACGCTTCAAATGGAGAGATCCTAGTAGTAGAGTGTCGATTGGTATTGTACCAATATTC GGTGAGTGAGAGATTATGGAACCATCTGGTTGGTTGTGATCCACTAAAACAATGAAGGTATATTTGTAAACACCTATTTACCACTTCTTTTTTGCCATCG GTCTGGGGGTGATATGCGGAACTGAAACAGAGGGTGGTGCCAATTATGTGGAAAAACTCTTTCCAAAAAGAACTAAGAAATTTTTTATCACGATCACAAA CAATGGTACATGGAACCCCATGTAGCCGAACTACCTCTGTAAGAAACCGTTGTGCCAAGTTTTCAGCTGTGAACTTAGTTGGAAGCCCCACAAAATGGGC ATACTTGGATAAACGATCCAAAACCATCCAAATGACGGTGTGTCCATGTGAGAGAGGGACATATTTGTTATATTGGCAGATCGTGCAATGGCGGATGAAA TCCTGAGTTTGTTTATACAAACCCAACCAATAACAAGAGACCGCCAAACGAGCTAGAGTCGATTTCAAACCTGAATGGCCGGAGGATGGAGTGGAGTGGT ACTCGGTGAGTAAGGTGTCACGAAGATCTTCCACATCGGTCCCTCAGGTGTTGTATAATACTTGTGAATCTTGTCAAGTATGAATGGCAGGGGAGACGAG AGGGAAGAGAAAACAGCGAGATCTTCACCTTGGCAACGAGATAAAGCATCGACTACTCGATTCGAGGTACCTGTTCTATATCGTATCTCGTATTGAAACC CAATCAACTTTGTTGCCCACTTTTGTTGTCCTGGAGTATGTAGACCTTGTGTCATCAAATGTTTTAAACTTTGTCGATCGGTCAAGATACAAAGTTTTCT CCCAAAAAAATACTGACACCACTTTTTAATTGCTTCTATAACAACGAACATTTCACAGACATATGTCGAGGCGTATTGCATGCGAGCAGACATTTTATAT CTGAAGTATGATAGAGGGTGTCCATTCTGAGACAACACAACACCAATGGCTACACCAGATGCGCCTGTTTCCATGTCAAAAGATTGAGAAAAATCGGGAA GGCACAACACCGAATTTTTTATTATAGCTGCTTTTAAATTTGTAGCCGAATGAGCCTCTGATGACCATATAATTTTTTTTTGAGTAGGTCAGTGAGAGGA GCGGTGAGTGTGGAGTAGCTTTTAACGAATTTTCGATAAAAATCGGTAAGCCCAAAAAACCTCGAAGTGTCGTGAGTAAACGTGATAGTGACTAATCTAA CATAACTTGTATCTTGTCGAGATCCGGTTGGACTCCCCCGAACGAGGTAATATGACCAAAATAGGTCAGAAATGTCACCCCAAAGATACATTTTGACAAC TTGGCATAAAACTGATTAGACATCAATAGGTCCATCATAATATTTAAATGGTTTAAAAGAGAAACTAAAGCAGAACTATAAACCAAGATATCATAAAAGA AACAAGGACAAACCGTCGTACGTGAGGCCTCAGTAAATGATTCATGATCGCTTGAAAAGTAGATGGTGCACTGATAAGTCCAAATGACATCACTAGGAAC TCGTAATGGCCATCAAAGGTGTGAAATGCAGTCTTATGAGTATCTGAAGCTAGTACTCTGATCTGATGGTAGCCATAATGCAAATCAAGTTTTGAGAATA TTCGAGCATCTCCCACTTTATCCAACAACTCCTCAATAGTGGGTATAGGAAAACGATCAGGGAAAGTAATCGTGTTTAATGCTCTATAATCCACACCGAA CATCCATTTGCCATCCTTTTTTCTCACTAGCAAGACTGGTGAAGAAAAAGGACTAGTGTTGGGAATCACGATTCCAACCTGTAACATCTCATGAAGCATT GATGTCATAATTTCTTTCTAAAAATGGGGGTATCTATAGGGTTTGATGTTCATTGGGGTAAATTTTGGGAGGAAAGGAATATAGTGATCATGTGGTCGAG GTGGTGGTAAAGTAGTGGGTATGGAAAAAACAGAGTCATAGTGTTCGAGTAGGGTTTGTATTTGGGGGTGAGTGATGGGAGTTGGTATGGTTGGGTCTAG GGGTAGAAGTGTAATGGTGTGGAAAGTAGTAATGCTATCAGTTTGGTAGAGAAATCGGACACAATGGGACCGAGGGTTCTCATCCATTTGATGCCCAATA CAACATTAGCTCCCTTAATAGGAAGCAAGTAAAAAAGGAATAAGGAATTCCTTGTTTTGCAGAGTGATGGGGATATTGTCACATAAGCCACTGCAATAAA TATGGGCCCCATTACCAACCATAACCGGAAAATTTGTAGTTTATGTGATGGGAAGGCGTAGAAAACTAGCAATCCGATTCTGGAGTATGTTATGAGAGCT CCTCGTGTCTACCAGAACCGTCACTTGGTGACCCAAAATGGTGCCTGAAACCTTTAAAAGTTTTTGGGAAAATCTTGATGCAAAGGGCCTGGTCAGAGAT GTGAAAATGGATCAGGTCTTCATTAGCAGGGTCGGGATTAACCAACTCAGGGTAATCTGTTGGAAAAACCGAAGAGCGAATGGTCGTGTCAATAGATGGG AATAAATCCTCTTCAATCAACATTAGAAACTTTTTATATTGACACCTATGACCTGGGTGAAACTTATCATCACATGTGTAGCACAACCCTTGCGGTCGGC ACTCGTGCGTCTGGGCAACAGAGAGATGACGAACAAGAAGGGTAGGTGATCCAGTAGGTTGTGGAAGGGGTACTGGACTGGTTGGTTTTGGAAATGTAGG TTGGGGGCCATAAGAGGGAAATTTGGGCGGTTTGTGAGAGAAACGACCAGCATCATGAAGTTTAGCCTCAACCAACTTAGTTAATCCTAGCGCCTAAAAA ATAGTTTTGGGGCACAAGATAGCGATCTCCCGCCTAATGTCAATGGATAGGCCAGGAATGAAACAATTGAGTATTACCTTTGGTGATAAACCTCATATTC TGTTAGTTAGTTTTTCAAAGCATTGTTGATAATAAGCAATTGTCCCCTTTTGAGTGAGTTTGAATAGTTCTCCATGGTGGTTAGTATAGGAAGATGAGCC AAAGCGTGTCTCCAAATCCCTAGTAAATGAGTGCCAAACCGAGAACTAGAAATTGTGACACATCCATGGGAACCAATTTAAAGCTTCTCCTAGCATGTAG AAGGGAACCATAGCAAGTCGTTGGTCTAGGGGCACAATGTAAAACTGGAAAAGTTGTTCTGCTTGAAAAATTCAACTGAGGGATTCCGATCCGTCAAATG GAATAAGTTGGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_173818; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_458390
| Blastp | - |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 43.97% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459949.1) |
| Pfam | - |
| Rfam | - |
| GO | - |