Ll_transcript_458382

• Id Trinity: TRINITY_DN49991_c2_g1_i4
• Name Transcript: Ll_transcript_458382
• Sequence: GTTGGTCCCAACTCATTTCTATCTTTGATTCTGTTCTTCCCCAAAAACATTATTAGCCACATTGTCACCCTTTTTTTGTGTGTAGAGGAGAGCTTTCTAG TGTATTCTCCTTATGTGATTCATCACCCCCATTGACGAACTCAGCGTGTGGAAGAGGAATGAACTGAGTAGGTGGGTCACCATGGAAATGTCGAAGTAAT GAAACATGAAAGATCGAGTGTATTTTCGCCGTGGGTGGAAGAGAAAGAGCATAAGCCACAAACCCTATTTTCTTCAGAACCCGATAGGGACCAAAATATC GTGGACTTATCTTATGATACTCACGGCGAGCAACGGTTTGTTGTCTGTACGGTTGGAGTTTTAAGAGAACCCAATCTCCCTCCGAAAAGGTAACATATTG TCTTCCAATTTGTGTTTGTGCAATCATTCGCTGTTGAGCGCGAATGAGATGTTGTTTTAATGTGGATAAGATTTGTGCTCTGTGTTTTATCGAGTTTGCT ACAGGAAACAAGAAAGAGGATGCATATTGTTTGAGGGTCGGAGGAGGACGCCCACATAACGCTTCAAATGGAGAGATCCTAGTAGTAGAGTGTCGATTGG TATTGTACCAATATTCGGTGAGTGAGAGATTATGGAACCATCTGGTTGGTTGTGATCCACTAAAACAATGAAGGTATATTTGTAAACACCTATTTACCAC TTCTTTTTTGCCATCGGTCTGGGGGTGATATGCGGAACTGAAACAGAGGGTGGTGCCAATTATGTGGAAAAACTCTTTCCAAAAAGAACTAAGAAATTTT TTATCACGATCACAAACAATGGTACATGGAACCCCATGTAGCCGAACTACCTCTGTAAGAAACCGTTGTGCCAAGTTTTCAGCTGTGAACTTAGTTGGAA GCCCCACAAAATGGGCATACTTGGATAAACGATCCAAAACCATCCAAATGACGGTGTGTCCATGTGAGAGAGGGACATATTTGTTATATTGGCAGATCGT GCAATGGCGGATGAAATCCTGAGTTTGTTTATACAAACCCAACCAATAACAAGAGACCGCCAAACGAGCTAGAGTCGATTTCAAACCTGAATGGCCGGAG GATGGAGTGGAGTGGTACTCGGTGAGTAAGGTGTCACGAAGATCTTCCACATCGGTCCCTCAGGTGTTGTATAATACTTGTGAATCTTGTCAAGTATGAA TGGCAGGGGAGACGAGAGGGAAGAGAAAACAGCGAGATCTTCACCTTGGCAACGAGATAAAGCATCGACTACTCGATTCGAGGTACCTGTTCTATATCGT ATCTCGTATTGAAACCCAATCAACTTTGTTGCCCACTTTTGTTGTCCTGGAGTATGTAGACCTTGTGTCATCAAATGTTTTAAACTTTGTCGATCGGTCA AGATACAAAGTTTTCTCCCAAAAAAAATACTGACACCACTTTTTAATTGCTTCTATAACAACGAACATTTCACAGACATATGTCGAGGCGTATTGCATGC GAGCAGACATTTTATATCTGAAGTATGATAGAGGGTGTCCATTCTGAGACAACACAACACCAATGGCTACACCAGATGCGCCTGTTTCCATGTCAAAAGA TTGAGAAAAATCGGGAAGGCACAACACCGAATTTTTTATTATAGCTGCTTTTAAATTTGTAGCCGAATGAGCCTCTGATGACCATATAATTTTTTTTTGA GTAGGTCAGTGAGAGGAGCGGTGAGTGTGGAGTAGCTTTTAACGAATTTTCGATAAAAATCGGTAAGCCCAAAAAAACCTCGAAGTGTCGTGAGTAAACG TGATAGTGACTAATCTAACATAACTTGTATCTTGTCGAGATCCGGTTGGACTCCCCCGAACGAGGTAATATGACCAAAATAGGTCAGAAATGTCACCCCA AAGATACATTTTGACAACTTGGCATAAAACTGATTAGACATCAATAGGTCCATCATAATATTTAAATGGTTTAAAAGAGAAACTAAAGCAGAACTATAAA CCAAGATATCATAAAAGAAACAAGGACAAACCGTCGTACGTGAGGCCTCAGTAAATGATTCATGATCGCTTGAAAAGTAGATGGTGCACTGATAAGTCCA AATGACATCACTAGGAACTCGTAATGGCCATCAAAGGTGTGAAATGCAGTCTTATGAGTATCTGAAGCTAGTACTCTGATCTGATGGTAGCCATAATGCA AATCAAGTTTTGAGAATATTCGAGCATCTCCCACTTTATCCAACAACTCCTCAATAGTGGGTATAGGAAAACGATCAGGGAAAGTAATCGTGTTTAATGC TCTATAATCCACACCGAACATCCATTTGCCATCCTTTTTTCTCACTAGCAAGACTGGTGAAGAAAAAGGACTAGTGTTGGGAATCACGATTCCAACCTGT AACATCTCATGAAGCATTGATGTCATAATTTCTTTCTAAAAATGGGGGTATCTATAGGGTTTGATGTTCATTGGGGTAAATTTTGGGAGGAAAGGAATAT AGTGATCATGTGGTCGAGGTGGTGGTAAAGTAGTGGGTATGGAAAAAACAGAGTCATAGTGTTCGAGTAGGGTTTGTATTTGGGGGTGAGTGATGGGAGT TGGTATGGTTGGGTCTAGGGGTAGAAGTGTAATGGTGTGGAAAGTAGTAATGCTATCAGTTTGGTAGAGAAATCGGACACAATGGGACCGAGGGTTCTCA TCCATTTGATGCCCAATACAACATTAGCTCCCTTAATAGGAAGCAAGTAAAAAAGGAATAAGGAATTCCTTGTTTTGCAGAGTGATGGGGATATTGTCAC ATAAGCCACTGCAATAAATATGGGCCCCATTACCAACCATAACCGGAAAATTTGTAGTTTATGTGATGGGAAGGCGTAGAAAACTAGCAATCCGATTCTG GAGTATGTTATGAGAGCTCCTCGTGTCTACCAGAACCGTCACTTGGTGACCCAAAATGGTGCCTGAAACCTTTAAAAGTTTTTGGGAAAATCTTGATGCA AAGGGCCTGGTCAGATGTGAAAATGGATCAGGTCTTCATTAGCAGGGTCGGGATTAACCAACTCAGGGTAATCTGTTGGAAAAACCGAAGAGCGAATGGT CGTGTCAATAGATGGGAATAAATCCTCTTCAATCAACATTAGAAACTTTTTATATTGACACCTATGACCTGGGTGAAACTTATCATCACATGTGTAGCAC AACCCTTGCGGTCGGCACTCGTGCGTCTGGGCAACAGAGAGATGACGAACAAGAAGGGTAGGTGATCCAGTAGGTTGTGGAAGGGGTACTGGACTGGTTG GTTTTGGAAATGTAGGTTGGGGGCCATAAGAGGGAAATTTGGGCGGTTTGTGAGAGAAACGACCAGCATCATGAAGTTTAGCCTCAACCAACTTAGTTAA TCCTAGCGCCTAAAAAATAGTTTTGGGGCACAAGATAGCGATCTCCCGCC
• Tissue: pods
• Gene name: LI_gene_173818;
• Additional information: -

Expression of Ll_transcript_458382

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.1
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_458382

• Blastp: Transposon Tf2-6 polyprotein from Schizosaccharomyces with 30.88% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 44.37% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPAC27E2.08)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450597.1)
• Pfam: Integrase core domain (PF00665.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;