Ll_transcript_458434

• Id Trinity: TRINITY_DN49999_c0_g1_i1
• Name Transcript: Ll_transcript_458434
• Sequence: CAAATTGAAAACACATCAATACATCAGTAATCTATATGCGTAGTAACAAAAAAATTCATAATTCTTTTTCCAATTTGGAAAAGGTACTGATGAAGTTGAA AATGAAAACCTCCCTATGGAAAATATCTTCCCACATACTTTGTCACATTCACAATCCCACAGTAAAATATTTCTAAAAAAAACTTAAATTAGAGTTCATC TTCCACATCCAAAAATTCCAATTACTTTGATACCCACACTGCTTCAATTCTCACGCCCTCAAAAAATTGTACCTTTACCACACTACACTACCTTTTACCC CATTGGGTTCTTCATCCATCAATCAATTTCCAAAACGATGACGTTTTTGGGTTCCCTTTTCTGAACCCAAAAATCCAAATGGGTATAGCGAAAGCATGGA GATTCAGTTTGGATCTGTTACAGCAACAACAACAACCCAATTGGAAAGGGAAACATGTCTGTTGGAGATTCACAATGAAACCAATTTCATTGTCTATGGT ATGCGGGTTTATGCTATTTGGGTTGGGTATGATTTCACTCTTAATGGGTCACATGGCTTCTGATCTTGAATGGTATTCTCAACGATTCATTCGCCGCAGT TTTTACTTCACATTGGACGGCAATGATCATGCCCCAATTGATATTTGGAAATCAAGATATTCTAAATACTACTATGGATGCAAAGAAAGAGGACGAAGTT TTGCTCCTGCCGTGCACGAGCGCAAGTCAAATGGCTACTTGCTTATTGCAACAAGTGGAGGATTGAACCAACAAAGAACTGGAATAACGGATGCTGTTGT TGTTGCACGAATCCTTAATGCTACACTAGTATTACCTGAGTTGGATCGTCATTCTTTTTGGAAGGATGACAGTGACTTCCACAATATTTTCGATGTTAAC TGGTTTATCACTTATCTCGCAAAGGATGTTCCTATTGTTAAAAGAGTTCCTTATAAGGCCATGCGGTCGATGGAGAAACCCCCATACATGATGCGTGTCC CAAGGAAATCAGAACCTGAATATTATCTCGATCAAGTTTTGCCAATACTCTTGAGGCGGAGGGTTCTGCAATTGACAAAGTTTGACTATAGACTAGCAAA TGATCTTGATGATGAGCTACAAAAGTTGCGTTGCCGTGTTAATTATCATGCGTTGAGATTTACAAAGCCTATACGACAACTTGGTCAAAAACTTGTTATT AGAATGCGAAAGATGGCAAGCCGTTTTATTGCAGTCCATTTGAGGTTTGAGCCAGATATGCTGGCATTTTCAGGTTGTTATTTTGGTGGGGGTGAAAAAG AAAGACTCGAGCTTGGTGAAATCAGAAAAAGGTGGACAACATTGCCTGATTTCAACCCCGATGAAGAGCGAAAGCGGGGGAGATGTCCTCTTGCTCCTCA TGAAGTAGGTTTGATGCTGCGAGCTCTTGGTTTTACAAATGACACATACTTGTATGTTGCATCAGGAGACATATATGGTGGGGATGAGACCATGAAGCCC CTCAAAGATCTTTTCCCGAACATGTATACAAAGGAGATGCTTGCCGAGGAAGAGCTGAAACCTTTCCTTCCATTCTCTTCCCGCCTTGCTGCTCTTGACT ACATTGTTTGTGATGAAAGCAATGTATTTGTCACTAACAACAATGGTAACATGGCCAAGATTCTCGCTGGTCGAAGGAGGTATATGGGTCATAAAAGAAC TATCAGACCAAATGCAAAGAGGCTTAGTGCATTGTTGTTGGAAAGGCACAAGATGGATTGGGATACCTTTGCAAGAAAGGTTAAGGCATGCCAGAGGGGA TTCATGGGAGAACCGGATGAGATGAAACCTGGAAGAGGAGAGTTTCATGAATATCCCAGCTCCTGTGTGTGTGAGAAACCATACATCGATGAAGAACTGA GCGAAGATGGACACCGTCCGCCGAAACTCGCAACTAGAAACATGACAGTTGAAATAGACTCCACAATGGATGGAAGAAAGGAAGAAAATGACCTATTACA CAAGGAGAGTGGCAGAAGGGCCAACATGTGATAAAGGCCATAAGGAAGAAGTTCCTTTAGGGTTTGCTTGTGAGTTGGGTTCTGGAAGGGAAGGAAGGGA AAATGAAGACTTCGGAGTCACCTCACAAGTATATTTCATAGTTCTGAAGTCTTCTCTTTCCTTCAAAATTCAACTGCCAAACGAACCCTTAAAGCGAGTT TGAATGTGCAATGATGGTAAAGTAAAAGTGTATCCCCCATTAATTGATTAGTTAAAATGCATTAAGTACTCCACTAACTTTAACTAATCAAGGGTAAATA CGGTGGTATCAGTTTATCTTATACTCAAACTCAGTGATCAAGGTGGACTCACCCTTGTAACTTTAGACCAAAGTTTTGATAAAGAAATGATAGTTGTTGG GAGTACTTCTTTGTTAATAGTATCAGTGTCAATTCAAATGCTCTACTGTACGCCCTCTACTGTAGTTTAACTAATTTCTCTCTCCTGAATTGCAGTTTAT TTATTTTTTTCTTATCTGCAATGATTTTGAATTATCTTTTCTCGATTGATTTAAAAA
• Tissue: pods
• Gene name: LI_gene_173852;
• Additional information: details;

Expression of Ll_transcript_458434

FPKM

• PAB: 0.7
• PNAB: 5.7
• PS1: 9.2
• PS2: 7.4
• PS3: 10.4
• PW1: 5
• PW2: 6.9
• PW3: 5.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_458434

• Blastp: Uncharacterized protein At1g04910 from Arabidopsis with 38.19% of identity
• Blastx: Uncharacterized protein At1g04910 from Arabidopsis with 38.19% of identity
• Eggnog: DUF246 domain-containing protein(ENOG410Z25U)
• Kegg: Link to kegg annotations (AT1G04910)
• CantataDB: Link to cantataDB annotations (CNT0002173)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424327.1)
• Pfam: GDP-fucose protein O-fucosyltransferase (PF10250.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;