Ll_transcript_458452

• Id Trinity: TRINITY_DN49999_c0_g1_i17
• Name Transcript: Ll_transcript_458452
• Sequence: AATGAAAAGCATGATCATGTAGGTTTGAAGGAAAGAGAATTCTTTGTTTCTTTATAGTTTATACCATTCTGGTTCCCTTACACTCTTCACTCACTAACAC TATTCCACACCACAGTGATCACACTCTTCATAATCATAACAATAAATTCACAAAAACCCTAAATTAGGGTTTCATCTTCCATAAAATCTGGGGTAGTTGA AACCCAACCATCTATACACACCCACATTACTTACTTTCATTGATTATCACATTTTTCATCTCAAAATCTCACCTTTACAATAATCAACCATTACTGTTTA CTCTAATACTCTCCACTCTTCCTTTTTTCCCTCATACACATTTTGAAAGGAACTGTCTACTTTGAAAAATGAAAAAAAATTGATTTTGATGACGATGATG AGAAATTGGGGTTTGTTTTTGTGACCCAAATAAAACGAATGAAATGGGTGTTGCAAAAATGGGTAGGTTCAGTTTATTATCGACGAACCTGTCTCTGTTA CCGCAACCCAACAACAACGTTAACAGTAAGCAGCATAATCATGTGGTTTGTTGGAGACAACAGAGGAAACCGATCTCATGGTCGGTGGTGTGTGGGTTGA TGCTGTTTGGTTTGGGTTTGATTTCGCTTCTAACGGGTCACATGGCTTCTGATCTTGAATGGTATTCTCAACGATTGGTTCATCCCACTTTCTATTCCAG ACTTGATGGGAGTTATCGTGCGCCAATTGATATTTGGAAATCACAATATTCTAAATATTACTATGGATGTAGTCAAAGGGGACGCAATTTTCCTTCTGCT GTGAGTGAACGGATGTCAAATGGCTACTTGCTTATTGCAACTAGTGGGGGACTGAACCAACAACGAACTGGGATAACAGATGCTGTTGTTGTTGCACATA TTCTTAATGCTACACTAGTTGTACCTGAGTTGGATCATCATTCTTTTTGGAAGGATGACAGTGACTTTATCAATATTTTCGATGTTGATTGGTTCATTTC TTATCTCGCAAAAGATGTTACTATTGTCAAAAGAGTTCCTGATAAGTTTATGCGCTCAATGGAGAAACCTCCATATACAATGCGTGTTCCAAGGAAATCT GACCCTGAATATTATCTTGATCAAGTTTTGCCAATACTGTTGAGACGACAGGTTGTGCAATTGACAAAGTTTGACTATAGGCTTGCAAGTAATCTCGATA ATGAGCTACAAAAACTACGTTGCCGTGTTAATTATCATGCTTTGAGATTTACCGAACCTATACAAGAACTTGGTCAAAGACTTGTTATGAGAATGCAAAA GATGGCACGGCGTTTCATAGCAGTCCATTTGAGGTTTGAGCCAGATATGCTCGCGTTTTCAGGCTGTTATTTTGGCGGGGGAGAAAAAGAGAGACAAGAG CTTGGTGAAATCAGAAAAAGGTGGACAACATTGCCTGATTTGAGCCCTGATGGAGAGCGAAAGCGAGGGAAATGTCCTCTTACCCCTCATGAAGTGGGTT TGATGTTGCGAGCACTTGGTTTTACAAATGATACATACCTCTATGTTGCTAAAGGAGAAATATATGGTGGGGATGAAACTATGAAGCCTCTCAAAGATCT TTTCCCCAACATGTATACAAAGGAGATGCTTGCCGA
• Tissue: pods
• Gene name: LI_gene_173852;
• Additional information: details;

Expression of Ll_transcript_458452

FPKM

• PAB: 0.5
• PNAB: 5.4
• PS1: 5.9
• PS2: 3.1
• PS3: 5.4
• PW1: 4.6
• PW2: 3.3
• PW3: 2.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_458452

• Blastp: Uncharacterized protein At1g04910 from Arabidopsis with 43.13% of identity
• Blastx: Uncharacterized protein At1g04910 from Arabidopsis with 42.63% of identity
• Eggnog: DUF246 domain-containing protein(ENOG410Z25U)
• Kegg: Link to kegg annotations (AT1G04910)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424066.1)
• Pfam: GDP-fucose protein O-fucosyltransferase (PF10250.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;