| Id Trinity | TRINITY_DN49999_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_458440 |
| Sequence | AATGAAAAGCATGATCATGTAGGTTTGAAGGAAAGAGAATTCTTTGTTTCTTTATAGTTTATACCATTCTGGTTCCCTTACACTCTTCACTCACTAACAC TATTCCACACCACAGTGATCACACTCTTCATAATCATAACAATAAATTCACAAAAACCCTAAATTAGGGTTTCATCTTCCATAAAATCTGGGGTAGTTGA AACCCAACCATCTATACACACCCACATTACTTACTTTCATTGATTATCACATTTTTCATCTCAAAATCTCACCTTTACAATAATCAACCATTACTGTTTA CTCTAATACTCTCCACTCTTCCTTTTTTCCCTCATACACATTTTGAAAGGAACTGTCTACTTTGAAAAATGAAAAAAAATTGATTTTGATGACGATGATG AGAAATTGGGGTTTGTTTTTGTGACCCAAATAAAACGAATGAAATGGGTGTTGCAAAAATGGGTAGGTTCAGTTTATTATCGACGAACCTGTCTCTGTTA CCGCAACCCAACAACAACGTTAACAGTAAGCAGCATAATCATGTGGTTTGTTGGAGACAACAGAGGAAACCGATCTCATGGTCGGTGGTGTGTGGGTTGA TGCTGTTTGGTTTGGGTTTGATTTCGCTTCTAACGGGTCACATGGCTTCTGATCTTGAATGGTATTCTCAACGATTGGTTCATCCCACTTTCTATTCCAG ACTTGATGGGAGTTATCGTGCGCCAATTGATATTTGGAAATCACAATATTCTAAGTACTACTATGGATGCAAAGAAAGAGGACGAGGTTTTGCTCCTGCT GTGCACGAACGCAAGTCAAATGGCTACTTGCTTATTGCAACAAGTGGGGGATTGAACCAACAAAGAACTGGGATCACGGATGCTGTTGTGGTTGCACGAA TCCTTAATGCTACACTAGTTTTACCTCAGTTGGATCATCATTCTTTTTGGAAGGATGATAGTGACTTCATCAATATTTTCGATGTTAATTGGTTCGTCAC TTATCTCGCAAAAGATATTCCTATTGTTAAAAGAGTTCCTGACAAGGTCATGCGGTCAATGGAGAAACCCCCATATACAATGCGTGTCCCAAGGAAGTCA GAACCTGAATATTATCTTAATCAAGTTTTGCCAATACTCTTGAGGCGGCAGGTTCTGCAATTGACAAAGTTTGACTATAGACTTGCAAATGACCTTGACG ATGATTTACAAAAGTTACGTTGCCGTGTTAATTATCATGCCTTGAGATTTACAAAGCCTATACAACAACTTAGTCAAAAACTTGCTATTAGAATGCAAAA AATGGCAAACCGTTTTATTGCAGTCCATTTAAGGTTTGAGCCAGATATGCTGGCATTTTCAGGTTGTTATTTTGGTGGGGGTGAAAAAGAAAGACTCGAG CTTGGTGAAATCAGAAAAAGGTGGACAACATTGCCTGTAAGACTTCAATCCTCTGACTTGTGATGATAAATCTTATCATTTGAACTGGATGAAAGATGAG TTGACGACATTTGACTTTTTTTCACCCATGTGATGCTGTCTCAAGGGAGTTAAAACCACTTCTATACTGATATCAAATGCATGGGCCCTTCCCTTGTGAT AATACAGGATTTCAACCCTGATGAAGAGCGAAAGCGTGGGAGATGTCCTCTTACTCCTCACGAAGTGGGTTTGATGCTCCGAGCGCTCGGTTATACAAAT GACACATACCTCTATGTTGCATCAGGAGAGATATATGGTGGGGATGAGACCATGAAGCCTCTCAAAGATCTTTTCCCCAACATGTATACAAAGGAGATGC TTGCCGAAGAAGAGCTGAAACCTTTTCTTCCATTCTCATCCCGCCTTGCTGCTCTTGATTACATTGTTTGTGATGAAAGCAATGTATTTGTCACTAACAA CAATGGTAACATGGCCAAGATTCTCGCTGGTCGAAGGAGGTATATGGGTCACAAAAGAACCATCAGACCAAATGCAAAGAGGCTTAGTGCACTGTTGTTG GAAAGGCGCAAGCTGGACTGGGATACCTTTGCAAAAAAGGTTAAGGCATGCCAAAGAGGATTCATGGGAGAGCCAGATGAGATGAAACCTGGAAGAGGAG AGTTTCATGAATATCCCAGCTCCTGTGTGTGCGAGAAACCATTCATTGATGAAGAACTGAGCGAAGCTGGACACCATCCGCCGAAACTTGCTACTAGAAA CATGACAGTGGAAATAGACTCCATAATGGATGGAGGAAATGAAGAAAGTGGCCAACTACACAACCCAAGTGGGAGAGGGTCCAATATTTGATAAAGGGAA GCAAGGAAAAAGTTTCCTTTAAAGTGAGCTTGAGTGTACATTGATAAAGTAAAAGGGTATCCACCACTGATTAGTTAAAATGCATTAAGTAATCAATAAC TAATCAGAGGTAATACACTTGTAGATGTTCATTTTATACTCAAACTCACCTATCATGGTGGACTCACCCTTGTAACCTTAGATCAAAGTTTTGACAAAGA AATGATAGAGTTATTGGTGATAACTTATGTTGTCACTGCCTTAGTGGAGATTCAGTTCATTCATATTGTGGATGACACAATTTAGATCATGTATAAGACT ATAGGGTATAAGCCATGAGTTGTGTTAATAGATATGTTGGCTGCAAATTTTATGTAAAATTTTATAGGCTATTTTATTTGTAACATAATTGTTTACTCCC ACCCCCAGGCAATGGAGAACCTGACTGTCCAACCATGACCATCCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_173852; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_458440
| Blastp | Uncharacterized protein At1g04910 from Arabidopsis with 34.66% of identity |
|---|---|
| Blastx | Uncharacterized protein At1g04910 from Arabidopsis with 41.38% of identity |
| Eggnog | DUF246 domain-containing protein(ENOG410Z25U) |
| Kegg | Link to kegg annotations (AT1G04910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003538741.1) |
| Pfam | GDP-fucose protein O-fucosyltransferase (PF10250.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |