Ll_transcript_531458

• Id Trinity: TRINITY_DN50001_c0_g1_i8
• Name Transcript: Ll_transcript_531458
• Sequence: GTTCAACTGTGAAGTGATTCGTTTGATTTGTTTTCCGGCCTATGTTGTCGTATTGGGCATGAAGAGTTGATCGGCTGTTTTAAACCGAACATCAATAATG ATTCTTTCTGCTCTTTTAACTTCGGTTGCAATTAATCTTGGCCTGTGTTTTTTATTTTTCACCCTATATTCGATCTTGAGAAAGCAGCCCGGTAACATCA CTGTATACGCGTCGCGCTTAGTTGTCGAAGGAAAAGTTAAAGAAGGTGGTGAGTTTAACTTGGAACGGTTGTTACCTACTGCTGGCTGGGTGAGAAAGGC GTGGGAGCCTTCGGAGGAAGAATTTTTGTCGAATTCAGGCTTAGATGCTTTTGTCTTCATGCGCATATTTATCTTTAGTTTAAAAGCATTTGCTTTTGGT GGAATCATTGGGATGTTCGTTCTACTTCCGATCAATTATTCGGGGAGTCAGCTCGAAGATTATTCGGATTTTCAACACAAGTCTTTGGACTTGTTCACTA TTGCTAATGTTAACAATGGTTCGAAAAGGTTATGGATCCATTTTTGTGCTGCATATGCTTTCACCGGAGTTGTCTGCTATCTTCTTTATTACGAGTATGG GTACATTTCATCAAAGAGAATTGCTTGCTTATATTCATCCAAGCCTCAGCTTCATCAGTTTACAATATTAGTTCGTGGTATACCCGTTCCACGTGGAAGG ACATGTAACGATGTTGTTGAGCGCTTTTTCCAAGAGTATCACCCTTCCACATATCTTTCACATTCGGTGGTTCGTCGAAGCAGCAAACTTCAAAATTTTA TTAATGATGCAGATAAACTGTACAAAAGACTTGCCAATCTAAAAAGTAAAAAGGATGTTCCTCAAGGGCACATACGCGATGGCTTTTTGGGAGTTTTCGG GCCTAAAGTTGATATTTTAGATCACTATGAAAGGAGATTGAGAAACATAGAAGATAATGTGAGAATAGAACAGTCTTATGTGGCAGCAAAGGTAAACTAT AATGCTTAGCACTGTTAACCTACGATATTCGAGTGATTATCAAATAATTGTTTCGTCGAAGGTTTTTTAACGTGTTATCTGGTTCACACCCTGCCTAATA ACAAACCAAAGTAACTTGATTATCATTTTCATTAAATCATTAATGTATACCAAATTAACCTTCACTGTGGCTTTGAACCATACTTTTTACTACTAGATTT GCCTTTTGAGGATTTGTGTTCATGGATATTCTTTCCTGCGATAGCGATATATTTTTATTAGTTAGATTGTTATGATCATGCTGTCTAATATATCGACTTA TATTCTATAATCATTTTCAACTTAAAGGATGTTCCTGCCGCCTTTGTCTCGTTTAAGACACGATTTGGTGCTGCGATAGCTCTAAACATTCAAGAAAGTA TCAATCCCACAGAATGGACTTGTGAGCAAGCTCCTGAGCCTCATGATGTTTATTGGCCTTTGTTTACCGTTTCATTCATTAGAAGATGGATCAGCAAGCT GGTGGTTTTTGTTGCTTGTGTTTATCTTACAGTTCTGTTTCTAATACCGGTCGCAATAGTACAAGGTCTTACCCATCTTGATCAATTGATAACCTGGTTC CCTTTTCTGAAAGGCATACTAAGACTGTCATTTGTGAGCCTAGTAGTAACAGGATACCTTCCGAGTTTGATTCTTCAGATGTTTCTGTCCTTTATTCCAC CTGTTATGGTTATGCTTTCATCTCTGCAAGGATCCATTTCATGGAGTCTGATACAAAAAAGTGCATGTACCAAAGTATTATTATTTTCCATATGGAACAT TTTCTTCGCAAATGTACTATCGGGTTCAGCTCTTTATCGAGTGAACGTTTTTCTTGAGCCGAAAGATATTCCCAGAGTATTAGCTGAAGCTGTGCCATCA CAGGCGTCATTCTTCATCGCGTATGTTGTGACAACTGGATGGACCACTATAGCATCAGAGCTCTTTCAATTGCCTAAACTTATTTTCAATTTCATAAATA GAATTTTCAGAAGAAAAATTGGTGACGGTTTTGAGCCCCCATCAATTCCTTACCATAGTGAAATTCCGAGGATTCGTCTATTTGCTCTTCTCGGTGTAAC ATATTTCATCCTTGCTCCACTGATGCTGCCATTTCTCCTGGTCTACTTTTGTTTGGGATACATCATTTACCGCAATCAGCTGCTAAAAGTATATGTGCCA AAGTATGAGACTGGAGGAGGGTATTGGCCTACAGTACACAACTCTACAATTTATTCATTGGTACTTATGCATGTAATAGCCATCGGCATTTTCGGGTTGA AGAAGCTTCCTCTTGCATCTGCATTGACTGTTCCTCTTCCAGTTCTCACACTTCTATTCAACGAGTACTGCCAGAAACGGTTCTTACCCTTATTCAAGGA CTATCCTGCCGAGTGTTTGATTAAGAAAGACAGAACAGATCAAAATGAGCAGAATATGCCAGAATTCTATGATAAGTTAGCCAATGCCTATAATGATCCT GCTCTGTTGCCAACAAAATATTCTGAAAGTTCTGATAGTCATACCTCTCCACTACTTCATGGTTCTGCAACTTAAGTTCATAAACCGTATATTCCGATGG TGCCGCGTCGGTTGCAACTGTATAGCTGCACTCACTTTGTAACTTCCTTTCAGGTTTGATTTGGTGGTCCTTGGTGTAACATGTCTGTTGTATTGTAAAT TATTTGGATTAAGAATGTAAGGTTGTAACAAGTATGGAGAAATTCAATTCTGGTATGGGTAATTAGTAATTACCATACATTTTTGGTTAGCATCATAGTG AAAAGAAAGACTATAGCTAGTTATAATTGTAACAGAGATTGGTTGGAGAAAAAAGGAGTTGTCTTTGTTAGTGCATGCATGCGGCTTGTGAGTTCCTCGA GTTCATCAAACAAATTGAGTACAAAGTAATGGATCAACTGAATAAAACTCCGGCAATGATATCTCTATTGTCCTTACTAAAATGAGCTATGAGGCTCATA GGAATGTGTTATTGAAAGTGTTGAATCAAGCCCATATCAAATTAGAAATCCAGCCAAAACTATACAGCAATAATATGGATCACCTGTCCCAAAATGATTG TCCTCGTATTCCTAGTCAATCAACTTTCTCC
• Tissue: pods
• Gene name: LI_gene_173859;
• Additional information: details;

Expression of Ll_transcript_531458

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_531458

• Blastp: CSC1-like protein HYP1 from Arabidopsis with 64.58% of identity
• Blastx: CSC1-like protein HYP1 from Arabidopsis with 65.02% of identity
• Eggnog: transmembrane protein 63C(COG5594)
• Kegg: Link to kegg annotations (AT3G01100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452941.1)
• Pfam: Calcium-dependent channel, 7TM region, putative phosphate (PF02714.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;