Ll_transcript_531784

• Id Trinity: TRINITY_DN50011_c0_g2_i6
• Name Transcript: Ll_transcript_531784
• Sequence: GTAGAAAGTGAGAAGGAAGTTTGTATCTGAAAAGGGTTGTCAAGTTTGAGTTTAAAAAAGTCAGAGCAGCTTCATAACTAACATTATAACTCTCTTCTAG GTTATTATATGTGCTCTGGTCTTTTCACATGTTATCAAGCCATCTTCTATTACTGACAAATATTGTTATGGTATTGATCCTCTGTGGCTAGAATGTGAAA TACTATTACCCACTGCATGATTCTAATAAACTGCCTGCTACCAATATGAGATTACTACATTATCATGTATTGGTCCAGAAGTGAAAGATGGATATGTTTG ATAAGGGATTTGTGCTCAAATTTAGAGTATTCATCCTATATAAGTATTGCTTCAAGTGAAGCATTATTATCTTACATATATGAATTAGACTGATATACTT CTCCCCTAAAAACCTTAGGTATTTTATTGTTAAAAGTTGCAACCGTGAAAATCTTGAGTTATCTGTGCAACAAGGAGTATGGGCAACACAAAGGAGCAAT GAATCCAAGCTAAATGAAGCCTTTGACTCTGTGGAAAATGTGATATTGATTTTTTCAGTCAATCGAACACGTCATTTCCAGGGGTGTGCAAAGATGACAT CCAGAATTGGTGGTTCTGTTGCAGGAGGAAATTGGAAATATGCTCATGGAACTGCACATTATGGGCGGAATTTTTCTGTTAAATGGTTAAAGTTGTGTGA ACTGTCATTCCACAAAACTCGCCACTTACGGAATCCATACAATGAGAACCTACCAGTGAAGATAAGTAGAGATTGTCAAGAGTTGGATCCCTCAATTGGT GAGCAATTAGCATCCTTGCTTTATATTGAGCCAGATAGTGAACTCATGGCTATCTCAATTGCAGCAGAGACTAAACGAGAAGAAGAAAAGGCAAAGGGAG TGAATCCCGATAACGCAGGAGAAAATCCAGATATTGTCCCATTTGAGGACAATGAAGAAGAGGAAGAGGAAGAAAGTGATGAAGAGGAGGAAAGCTTCAT TCAGGGTGCTGGGCCACCTAATCAAGGCAGAGGAAGGGGCAGAGGCATGATGTGGCCGCCTCACATGCCTCTTGGGCGTGGAGCAAGACCTATGCCTGGA ATGCCGGGATTTAACCCAGGAATGATGGGTGATGGATTACCCTATGGGCCTGATGGATTTGGTATGCCAGATCTTTTTGGCATGGGGCCCCGCGCTTTTG CCCCATATGGTCCTAGGTTCTCTGGTGATTTTGGAGGCCCCCCAGCAGCGATGATGTTTCGTGGGCGACCCTCACAACCTGGGATGTTTCCTGGTGGTGG GTTCGGGATGATGATGAATCCAGGACGCCCTCCCTTTATGGGAGGGATGGGGGTGGGTGGTGGAAATCCGTCAAGAGGTGGTAGGCCAGTCAACATGCCT CCAATGTTTCCCCCACCTCCGCCCCCACCTCAGAATGCCAACCGAGTCCCCAAGAGAGATCAAAGAACCAACGATCGTATCGATAGGCAGGGCTCAGGAT CAGAGCAGGGCAGGAGCCAAGACATGCAGAGTCAAAATGGCGGACCGGATGATGACATGCAATACCAGCAAGGATACAAGGCAAATCAGAATGATCAGAA TGAAGATAGTGAAAGCGAGGATGAAGCACCGAGGCGGTCACGACATGGAGAGGGGAAAAAGAAAAGGGACACATAGAAGAATGGCAATACAAACTCTAAA TGCCCTTCACCAAGCACAGCATATTGATGATCCACTAACCAGGATTCTAGTTTCCAATGAATTTATTTTCAATGAATTGATGAGACCAGATCTCTTTGTA TGAGTTGTTTTTTGCCTAAGAGACCTGGGGTGCTTCACAATAAGTTTATTAATTTATTTCACATGTCATGTCATTTTTACATATGGTTCATTGGACGGTT TAATGTTAAATTTAACACAATCTGAGGCCAAATTTAGTAGACTCAGAAGAATGTATACCTATTTATTTAAAAGTTTATATTTTTAATACATAGATGGTGA ATTAAACACAAGTAATAATTGCATTATTGCATAACCCCTGTCTCTGCATCCTATACGGACACATGTT
• Tissue: pods
• Gene name: LI_gene_173959;
• Additional information: details;

Expression of Ll_transcript_531784

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.1
• PS3: 0.1
• PW1: 0.3
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_531784

• Blastp: 30-kDa cleavage and polyadenylation specificity factor 30 from Arabidopsis with 63.99% of identity
• Blastx: 30-kDa cleavage and polyadenylation specificity factor 30 from Arabidopsis with 89.2% of identity
• Eggnog: zinc finger(COG5084)
• Kegg: Link to kegg annotations (AT1G30460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419266.1)
• Pfam: YT521-B-like domain (PF04146.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;