Id Trinity | TRINITY_DN50012_c1_g4_i1 |
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Name Transcript | Ll_transcript_533564 |
Sequence | CTGCCATTCCGGTTGCCCACCCAACATTTTCTCTCTCTATAACTATACCAACTAACCCAACATTTTCTCTCTCTACCCTTTCATATGAACTCTCTCTATC TCTCTCAATTTTCCATCACCAATGGTAATGGCTTTTCGACTGCACAGTAACACTAATAATACCCTTTTTCTCTCTTCTTAATATATATATAAATCAAATG TTACATCTTTTTATTCATTTCAATCTCAAATCTTTTGCCACAACCACGTGAAACCCTCTTATATCCCTTTATTGATTCTATTCCCTTTCTATTTTGTAAC ATGTGTGAAATTATTCTATTCCCTAACCCCACTTGTATAGCTTCTGTAGCAGGCGTTTCTATTTTAACCAATTTGTTTCATTTTACTTTTGTGTTGTTTA GGTTGTTTAGATAGGGTTTGTAGTTGTAGATGGATAGCATCGGTTGGAATTTGAAGGAAAAAACACATTTTGATTTTAAATCCTTTCTGGGTTTCTGGTG GATTCAAATGGGGTTTTGCTCAATTAGGGTTTTGAGTTGTATTTGTAGATGAGGGTGGTTGGAATTTGAAGGAAAAATTAGATTTTGATTCTGAACCCTT TCTGGGTTTTTGGTGGATTCAAATGGGGTTTTGGTCAATCGGGGTGTAGGTTGTAGTTGTAGATGATTAGGGCTGTTGGAATTTGAAGGAAAAACCGGAT TTTGATTCTGAATAGTTTGTGGGTTTTGTTGGGATTCAATTGGGCTTTTGACAAAGTGGCGAAAATGGAATTGGATGCTGCCGAGGAAGAATCGGCACCA GAGGTTCATGTACCTGCTGAAATTGATTGGAAAATGCTTGATAAATCCAAGTTTTTCGTCCTTGGTGCAGCACTTTTCTCTGGTGTTTCGGCAACATTAT ACCCTGCTGTTGTGTTAAAAACCCGACAGCAAGTAGCTCAGTGCCATGTTTCTTGCATCAAGACTGCATTTTCAGTGATTAAGGGTGAGGGGTTTCGAGC ATTGTATAGAGGATTTGGAACCTCTTTGATGGGTACGATCCCTGCTAGAGCTTTATATATGGCGACTCTAGAGATTACGAAGAGTAATGTAGGTACTACT GCGACTGTTAGGTTAGGCCTGGCTGAACCAACTGCTGCCACAATAGCAAATGCAGCTGCCGGGTTGAGTGCAGCCATGGCGGCTCAACTTGTTTGGACCC CAGTCGATGTTGTTAGCCAGAGGTTGATGGTTCAGGGTGGAGCTGATTCGCCACGTCAATATACAAATGGGGTTGATGCCTTCAGGAAGATTCTTAGGAA TGATGGTCCAAGGGGATTGTATAGAGGTTTTGGGATATCAATTCTGACCTATGCACCTTCAAATGCGGTTTGGTGGGCTTCATATTCTGTTACACAAAGG CTCGTTTGGGGTGGAATCGGATACTACTTATGCAAGAAAGATGTGGATGATAGGAGTGAGACTACTAGCGCAGGTAACGAAATGAGACCGGATTGGAAAA CAGTGATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCAGGTGGCATGTCTGCTTTAATCACCATGCCGTTAGATACGATCAAGACAAGACTGCAGGTCTT GGACGGCGATGAGAATGGTCGTCGAGGACCAACAGTTATGCAGACAGTGAGAAACTTGGTAAAGGAAGGTGGTTGGATGGCATGTTACAGAGGGTTGGGT CCAAGATGGGCTTCAATGTCGATGTCTGCAACAACAATGATCACTACATATGAGTTCCTAAAACGACTTTCCACGAAGAATCAAGAGGTTTTGACATGAC CAAGACCAAGGGTAGAATTATAACCAACCAAAAGAAAACAGAAAAGGAGAAAAGGTTTTCTCCTCTTCTTTCTTTCATTAGTCTAAAGCTATGGCCTTAT TTCCTTTCAACTAGTTTTTTCCTCCCACTTTTACTAGACAGCATGACTTCTTGATTATTGCAAGTCATTGTAGCTCATCTTGTATATATTTTGGAAATAA ATAAGTTACAAGTTCTAACAACTACATTTCTCTTACTCATTATTCATATTATGCATATCCTTCATATAGAGTTACTATGAGAGTTTGACTATATTTTCC BLAST |
Tissue | pods |
Gene name | LI_gene_173970; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_533564
Blastp | Solute carrier family 25 member 44 from Pongo with 30.29% of identity |
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Blastx | Solute carrier family 25 member 44 from Pongo with 29.71% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (100172017) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436512.1) |
Pfam | Mitochondrial carrier protein (PF00153.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |