Ll_transcript_533494

• Id Trinity: TRINITY_DN50018_c3_g1_i10
• Name Transcript: Ll_transcript_533494
• Sequence: AGGAGTTAGCTCTGTGAGTATATATCTATCAGTATTCTGATTCATTGACATCAGTTGAAGGTCTTTTTTTGATAATTATGCATTTCTGAAGTTGGAAGAA AACGACGTAAAACATGTGGAAAACACCGAAGGCACTCATGAAGGAACAAGCAGGAAGAGTGTGACTGATACCAACGAAGAGAAAGCAATTGTACTTTACA AGCCTAATGCAGAGCCACCAGAAGCAAATGGAAGCACCACATCAGAAGGAAACTCAAAAGTCCATCTTCTGAAAGTCCTAGAGACACGTAAATCAGTGCT TCAGAAAGAGCAAGGCATGGCATTTGCACGTGCTGTTGCTGCTGGTTTTGACATTGACCATATAACAGCTTTGATGTCATTTTCTGAATGCTTTGGCGCA TCTCGATTGAGGGATGCATGCAAAAAGTTTAGGGATCTATGGAAAAGAAAACATGAAACTGGACAATGGCTTGAAATTGAAGCTGCTGATGTGATATCCA ATAATGCATCTAGCTTTATACTTCCCAATATGTCCCCTGCATCCCATCCTGAATACAACTCGGAGAGTAATGGGAAATCAAGTTCAGATGTGCCACCAAT GAACCACCAACCATCTGCAGGCCACCAAGATAATATTCAAGGTCAATTTCCACATCATATGTACCCTCCTTGGCCTGTTCATTCTCCCCCGGGAACTATA CCAGTATATCCGTCATATCCAGTGCAAGGCATACCCTACTATCAGAGTTATCCAGGAAGTGGTCCATTTATCCAGCCAAGTTATCCACCTATGGAGGACC CCAGACAAATTGCTGGTCAATATCTGGGGCACAGAAGACATTCTATGGATAGTAGACAGAACAATACTGAGTCAGAAACCTGGGATGTAGAAGCTTCAAA ATCAAGGTCGCAGGATGAAGTGGATATGGAGAGGGAAGGTTCACAGACTGGAAGTCGACGGAAGAAGGCTAGCCGATCAGGGAGGCAGAGTTCTGGCAAG GTGGTCATACGGAACATCAATTACATAACAAAGACAGAAAACACTTCTGGCAGTGGATCATATTCAGATTCTGCCTCAGAAACTGATGAAGTTAAAGATA ACCAGGAATCAGTGAGGTCCTCAAAAAGAAGCGAGCCCAGAAAAGAATCTTCGAATGATAAGGAAGAAATAGACCATGGGAAGGATGCAGAAGGAGGGCA CTGGGAAGCATTCCAAAACTGTTTACTGAGAGATGTTGATGAAGATAGGCATGCCAATGACCAAGACCATTTTGATGTGGGAAAGGTGGATCACATGAAA AGAAAAAAACAAGTTGCAGGCAATGATCCTTTGGTTCTTAGTGAGCGGGATATGCATGAAGTTCAAGGCAGTGGTACTACGGATATGCTTAGCATTGGCA AAGGACCGTCTCGCGTGCTTAAGGCATCCAATAATGATTTATTGCTATCTGTAAGGGAAGGACACTCTGGAGATGGTAGGTCAGTAGATGATGTACAATC TCTAGAAGCAAACAGAAGACGGGGTGGTTATAGAGGAGCTGCCAATGATGATTTCATCACCCCTAAACAACAAAGTCAGTTTGGTAATTCATATCCTTCA TCGGATATGGAAACTGTCAGCGGACTAGGTTATTCAAACAATAAGTTGGAAAGGAAGTTGTTTCATGATATGGATGACGACTCCTACATAGTGGATTATA GATCAAGCCAAGTCAGTGATGCAGGAAATGTTGAGAGAAAGGCTATTGACATGGACTCTGAGTTCCCAATGGTGAATCAAAAGGAAGAAAAATCTTATAA TGAGAAAAACCATACGAATTATCATCAAGATGAATTGAGTATGATGCCTGAAAGGGGAGCTGAATGGGGTTCAATGAGTTATGACCCTGCTTTAGACTAC CAAATGCAGGCCCAGGCTGGTACTCCAGAAGATAAGAACAAAGAGGTATTGGCTGACACCAAACCAGGATCTAAGAAGATGGACAAGGAGCCGAAATCGA AAATTACTCCAAACAGTTCTGATAAAAGAAAGTCCATTGGGCCAATAAGGAGAGGGAAAACTTCTAAACCAAGTCCTTTGGATGAAGCACGGGCACGTGC TGATAAATTAAGAAACTACAAAGCTGATCTTCAGAAAATGAAGAAAGAGAAGGAAGAGGAAGCGATAAAGCGCATAGAAGCTTTAAAGATGGAGAGGCAA AAGAGGATTGCTGCCAAGAGTGGCACAATCACTGCACACTCACCAGCGCCGTCACAGCTAGCAAAGAAACAACTTCCAACAAAACTTTCTCCAAGCTCTT ATAAAGGATCAAAATTTAGTGATTCAGAGCCAGGACCATCTTCACCCCTTCAAAGATTTTCTATTAAAACTGCTTCTGTTGGATCTAATGATTCTTCAAA AATGTCGAAAACCAGCAGATTGAATACTGGAAGCCACTTGACTGAAAACAAATTAAGCCGTTCAGTATCTTCTTTGCCCGAGTCTAAGCAAGAGAAAGTT GTTGGTTCAACTGATATTAAGGCATCAATGGCACGGATTAGAAGATTGTCAGAGCCTAAAATGAGTACCATTCGTCAGACTCCCTCAGTTAAACCATATA GCGCTAGAACAATTTCAAAGACTAAATCAGCTGATGGACCCGGGATCAAAAAGATTTCTGCTATTGTGAATTATGATAAGAGCAAGACAGCAGCCCTCCC AGAACTGAAAATCAAAAGTTCTAAAGCAAGTGACAGTGTCCTAGCTAAATCACCAGTCAAAGAGACGACACAGAAGCTGAAAGGTAACAAGTCTAGTACG ACACAGAAATTGAATGGTAACAAGTCTAGTATGAATTCAGAAGGTACCATGCCGAAGAAAAGTGAAATGAAATCTTCATCCAATGATGATGGAGATGACA ATCCTGTTGTTGACAAGACTGTCGTGATGCTTGAGCGTGAGAAACCTCATGCTCCTGCCATTCTTAACTCTGAAGAAAAAGTCAGGATACCAAAGAAACG TGATAGTGATATAGTGGTGGAGAAAACTGACACAGCATCAAATTATGTTCCTATTCGTGCACCTGTTTCGCCACTAAACATGGATATAATAAATAAAGTA ACAGAGAACCAACCACACCTGCAGCTCGTATCTAATATGGTCAAAATTCATAATACAGAGAAAGAACCTTCAAAATCATCCAGCATTTCAATTGCCGAGG AAACATACCATCCCCCATATGCTCGAGTTTCTTCTTTGGAAGATCCTAGCACAAGAAATACCGAGTATGGTAAAGCATTCCCCACAAATTTAGACAATGC AGAAATTGGCATGGAGACTGTTAAAGCACATGTGTCTGACATCAGGAACTCAACACTTGAGAAGATTCCTGAAGCAATTGATAAGCCTCAGATAAAGGAA ACATCGAAAGGGTTCAGAAGACTGCTAAAGTTCGGGAAAAAGAGCAGCTTGGCCACTGCTGGACACAGTATGGAATCAGATAATGTCAGTATTGATGGTT CTGACGCAGATGAGATTGGAACTAACAGTTCCTCTAGTGAAGGTAACATGCTCCTCATGGGAATCACGATAATAAAATAATATCCAGAGATGACATCCCT GGAACACTTTCTGATATATGGTGCACTAGCACTTCTAAGTTCCAATTTTGATAATATGGAAACAGCCTCTTCGCTTACAAGGGTAAGGCTGCATACATCT ACCTCCCCAGACCCACTAGGTGGGAGCCTCGCGCACTGGACCACCCTTTTATAGTGTTGATACTACGATTCACATGTTGTTAAGGTCAAATCTGTGAGGG CTGAGTTAACTTCAACAACCTGCATCCTACAAAAACAAAAAAGCCTCATTCCCATTAGATGAGGGTGGCAACCTGCAGCCTAACATTTAGGAAATCATTG CGATTCTGTAGTCGAAAAAGTAAATAGCCTAGACCATTCAATCAATTACTAATAACTGAAGGATGATGGCTTGATGAATATTTTACCTTAGCCTGTGCTT TAGAGCACGTAGATCTTTTTATATTGGATTTTTTTATCCTTTTCCTGAATGGCCACTGGTTGAAGATTGAGTGTGTTGTTGATAGATTGCATGAAAGAAG ACCACCATACTAAAATTTGTGACAGATATATACTTAATGTGAGCATCATATTTATTGTCATTTTCAGTTCATACTTTGAAGAATTTGATCTCTCAAGATG AAACCCCCACTGCCAGCACAACTCAACAAAAATCTTCCCGCGCTTTCTCGTTGTTATCACCATTTCGAAGCAAGAAGTGAAGAAGAGATAATGATGGATT GATAGAGTGGATGGTGTTCTTGGTTAAGGTTGATGCAGTGACTAGCTATGCTAGACATTTATTTGATTTGTCTCATTTCCCACCTAGTGTCATTAGTTAC TATTGTCCTGCTGGGAAAGATCAGCGAGTAATGTATTGCTACAAATATTGATCTTTCTATATTAATGTTTGGTTGTTCATATGCAGAAGTAATTTGTAAA TTGTACTCTTTCCTGGTTTTGATTAAACATTATCTCTGGATTAAGGGGGTGTTTCTATTCTCACCTTCATTGGAACTTGTCTTTTTATAAGAAAATAGAA GCTAATACCTATCATGCTAGTACTATGAAAATAGAAGAAAAACAAATCGCAAGTGC
• Tissue: pods
• Gene name: LI_gene_174014;
• Additional information: details;

Expression of Ll_transcript_533494

FPKM

• PAB: 0.3
• PNAB: 0.2
• PS1: 1.4
• PS2: 0.6
• PS3: 1.1
• PW1: 1.1
• PW2: 0.5
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_533494

• Blastp: COP1-interacting protein 7 from Arabidopsis with 25.91% of identity
• Blastx: COP1-interacting protein 7 from Arabidopsis with 36.99% of identity
• Eggnog: NA(ENOG4111427)
• Kegg: Link to kegg annotations (AT4G27430)
• CantataDB: Link to cantataDB annotations (CNT0000925)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427873.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;