Ll_transcript_533517

Id TrinityTRINITY_DN50018_c4_g1_i18
Name TranscriptLl_transcript_533517
SequenceGTTTGGTACACGAAGTTGGGACAGGTGATCCTGGTCCCAGCTAGTGAGCCCAACAAAGCCCCCTACCGGCTGAGCAAGTCACCAGTCTCAATCCCATCAA AATTTTGTTACAACAAACAAAAACACTCCATTTCCCAAATCTCTCTCTCTCTCTTAGTTTTGGGCTTCGATTGAAGCAAAATTAGGGTTTCGATCGATCG TGAAAGAAGAATAAAAAGGAGATGTTTTTGGTAGATTGGTTTTATGGGGTTTTAGCATCACTTGGTTTATGGCAAAAGGAGGCTAAGATCTTATTCTTAG GTCTTGATAACGCTGGCAAAACCACTTTGCTTCATATGCTCAAAGATGAGAGGCTGGTGCAACACCAGCCAACACAATATCCAACGTCGGAGGAGTTGAG TATTGGGAAGATCAAGTTTAAAGCTTTTGATCTTGGTGGTCACCAGATTGCTCGGAGAGTCTGGAAAGATTACTATGCCCAGGTCCCTCTCTTTTTCTTA TTGCATACTATACACTTTTGTGTACATATTTGCCCGATATGGACGGTATCTAAATCATGCATTTTATGAATTTAAAACACATGGTTAGTCGCCACTAGAC CATCTCGAGATGGATTAAGTCTTGTTCTCTGAACTCCTAATGTACTGATTCCTCGGTAATTTGCTTTACATGGCTGCACCTGCTAATATTTGTCGATGGT TTAGTGAGTCAGATATAAAGCTGTACGAACTTGTTGGCTATGATGTTATTATATGACATGATACATTGGTACAACTATTCTTGACAAATATATGATACAA TATGTTGAGGATACATATATAAATATGCCTTAAAATATTAATAAAATATAATGAATATATAATTGCAAGTCAAAAAAGAAAACTAAGAATCACTTCTTAG ACATTACTAAATAGTAAATACAACATGAAAATTGTTAATCGTTGTGCATCTCAATGCTCTATGCGTCCCATGCGGATTTTACCCAGCAACCAAGAAGTGT TCATGTGACTCTGCCTTATGCCGCCCCTTTGCTCTGTTCCTCATGCGTTATCCAGAAACCGGGAAGTGCTCACCCATCTCTCTGCTTTATGTGTCCTGTG TGGATTTTATCCAGCAACCAGGAACGGAAGTGCTTGTGCGTCTCCTGAAAGAATGGGAGAGTTGTGCAGATTTGACCCAGCAAGCAAGAAGAGTCTTGCT CGTGCATCTAAGTTGCCAACCTTTGCTACTTTGTTGCATAGATGTAGGCAGAGAAGAGACATGCATCATATGCCAATATGTTAGAGGAAACTGGAGTAGA TGCAGTGACAAAAGTGAAGAGTTTGTGTTAAGATGAAAGTTCAATGTCATATTGGTATCAGATACTTATCCCATGTCAATGTGTGAAGAAAACATAGATG TCTTTGCTTCATAGCTTGTAGTTTAACCTATTAGGTATTTTCTTCGGATGCTCAGTGTGGTAATTTATAGTATTATAATTAAGTTGTTTAAAACTACTCT GTTGTTGTGGATTGTTCTAAAAAGACGACAACTAAATTAAAAGAATTCATTGCTGATGGCACCTTTTCACTTTAGAGGGGTGCTAATAGTATTATCTTAT TAGACCCATCTGCTTCTGAAGCAATTTATGATTTGGTAACATGTTCAACATTCTAAGTAAGAATTTTATTTTCTTACATTGATTATTCATTTTATGATCA TAAGTTTCATCCTTCTTTGATGCAGGTAGATGCAGTGGTCTACTTGGTCGATGCTCATGACAAGGAAAGATTTGCCGAGTCAAAAAAAGAGCTGGATGCT CTCCTCTCTGATGAATCCTTGGCCAATGTCCCTTTCCTTATCCTTGGAAACAAAATAGATATTCCATATGCTGCCTCGGAAGAAGAGCTGCGATACCATT TGGGCCTGACCAACTTCACCACAGGTAAGGGTAAGGTGAATTTGGTAGACTCGAATGTTCGTCCGATGGAGGTATTCATGTGCAGTATTGTGAGGAAAAT GGGCTATGGAGATGGTTTCAAATGGGTTTCTCAGTACATCAAGTAGTTTCTGTTAGTAAGAGATGACTTGGTATCTCATTTCTAGAAGTTTGTTTATATA GTTATGAATTTGTTGAGGTGTTGAAAATTGCAGTATATTTCAATTTTTACTTATAAAAGTTATATTTGGGAACCCATTCCCCCTTTTGCTTGTGATGTTT TTTCTATATGGAGAAATTGAGGAGCCAAAAGCCAAAAGCCAAAAGCTAAAAGCCAAAATGATGATCACCCACATAAACTGGGTTTCCACAATTTGCTTAG CCAAGACATTATCAAATCAATAACTCATGGCATAAAATACACCTTTTAGGGTGTTATCATGATTAAATATTTTTCTTATAATTATCTGATAATGTTCAAA AGTCCTCATTGTTTT BLAST
Tissuepods
Gene nameLI_gene_174016; 
Additional informationdetails; 

Expression of Ll_transcript_533517

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_533517
BlastpGTP-binding protein SAR1A from Arabidopsis with 92.52% of identity
BlastxGTP-binding protein SAR1A from Arabidopsis with 92.52% of identity
EggnogSmall GTPase component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. SAR1 controls the coat assembly in a stepwise manner. Activated SAR1-GTP binds to membranes first and recruits the SEC23 24 complex. These SEC23 24-SAR1 prebudding intermediates are then collected by the SEC13 31 complex as subunits polymerize to form coated transport vesicles. Conversion to SAR1-GDP triggers coat release and recycles COPII subunits (By similarity)(ENOG410YIKI)
KeggLink to kegg annotations (AT4G02080)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019440619.1)
PfamADP-ribosylation factor family (PF00025.20)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;