Ll_transcript_533425

• Id Trinity: TRINITY_DN50020_c0_g1_i1
• Name Transcript: Ll_transcript_533425
• Sequence: ATAATAACATAGAAACGTGGATGAGAGAAATAAAAGTGATTACATAAATATGGATTGGTGTGTGACACACAGCTTTCGTTGATTATATATTTATCTGTTT CTATCAACCATAATTCTTCTTGAATAAAAGAAGCACCCAAGCAACAAAAAAAAAAAAAAAAGAGGGCCTCTCGCCCTCTTTGCTTATTATGCATTCTCTC TGATATTATATTCCACCAATTTCTCATTTTGGGTTGTCTTCATTTGGATGGAAATGGACTCCGGCAAACTTTTCATTGGAGGGATTTCCTGGGACACAAA TGAAGACCGACTCAGACAGTATTTCCAGAATTTCGGAGAGGTAGTGGAAGCTACGATAATGAGGGATCGAATCACAGGACGTGCCCGTGGTTTCGGGTTT ATTGTTTTTGCTGATCCTTCTGTTGCTGAGCGAGTTGTTTCGGAAAAGCATGTCATAGATGGAAGAACTGTTGAAGCAAAAAAGGCCGTCCCTAGAGATG ATCAGAATCTTCTGAACAGAACAAACAATAGCAGTCATGGGTCTCCTGGTCCTACTCATAGTCCTACCCGCTCAAAGAAGATATTTGTTGGAGGTCTAGC ATCTACAATTACTGAGAGTGACTTTAAGAAATACTTTGATCAATTTGGAACAATTACAGATGTTGTCGTGATGTATGACCATAGCACTCAAAGGCCTAGA GGTTTTGGATTCATCACCTTTGGTTCTGAGGATGGAGTTGAGAAGGTGCTCCAAAAAACTTTTCATGAACTGCATGGTAAAATGGTTGAGGTTAAGAGGG CTGTTCCAAAGGAATTCTCTCCAGGTCCAAATAGAGCTCAGTTAGGTGGATATAACTATGGTCTAAGTAGAGTGAGTAGCTTTGCTAATGGTCTTGTTCA GGGATATAATCCAAGTTTGGTTGGAGGGAATGGACTTAGAATAGACGATAGATTGAGTCCTGTTACTGTTGGTCGCAGTGGATATCCTTTCATGAGTCCT AGTTATGGGTCAGAACTCAACTTTGAGCCACCGTTGAGCCAAAATGCAAACTTTTCTTCCACCCTTCTCTTAGGACGTACATTGAACCCTTCATATAGTG GAAATCCTAGCAGGTACAGTAATTCAATGGGGTATGCTGGTATAAGTTCAACAAGTCAGAATTTTTGGGGGAATGGGAATCTTAACTATGCTACAAACCC TGGAAACTCTGATTCTTATGTTGGCTATGGAAGCGAGAATTTAAACATGGGTTCTTTTGGTCGTATTGGACCACTTTGGAGTTCCTCCATTGGCACTGAT CAAGCTGAAACCACTGGCTCCGGTTATGGTAAGAGCAGTCCTAGTTACAGCTCCGGAGATGTGAATTTAGGATCAAAAGCAGTAGGTTATGGAAAAAGTC GAAAAAACTTCGCTGCACCAGCCTCATCACACGCTCTATCAAACAGCAGGTATGATGAAGCATACAATTACAATGATACTTATGAAGCTGGATCATTTTA TGGGGTCCATACTTGGGGATTATCACCTTCAGAACTAGAGGATTCTGGTTCTCTTGGTTTTGGGCTTGAAAATGTTGTCTCAGATTTAATGAGCCAAAGA TCTGGTGGCCACATTGAGGCTCATGCTGTTGCCAATAGACAACCAGGAATTGCTGCTTAGCAAAGTTATCCGCGGGTTCTCAAATGTCCTAGTGAAGTAT GTCTGCTGCAGAAGGCAAAAGATTGTGGAAAGCATAATTTTTATTGTTCTGATATGCTTTAGTAGTGCTTCAAGAATTTCATTAGAGCTAGTTGGTTTGG CTGTGTTGAATAACTTACAAATACAGAGAGTAATTACAAGGGCTTTACACTTAAAGGGTTGAGATCTTGTGTTAAACATAGACTTTGTATGCCAGAACTT TCATGATGCACATCTCTAGTGACATCAATACACAAAACAAAAAGTCCTTCCTTTTCCTTATTCTTTGCCCATTTCTAAACTATTCTATTTTTCTTTTTTG TTATTGTTGATTTTTCATACTGTTAAGAAATACATTTGTTTATTTCTCTGATATTATTATCAATGAATTTTCATCTGACTTCTATAAAATAAAAGCTGAC
• Tissue: pods
• Gene name: LI_gene_174031;
• Additional information: details;

Expression of Ll_transcript_533425

FPKM

• PAB: 11.1
• PNAB: 12.3
• PS1: 17.9
• PS2: 22.2
• PS3: 26.3
• PW1: 13.8
• PW2: 22.5
• PW3: 35.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_533425

• Blastp: Heterogeneous nuclear ribonucleoprotein 1 from Arabidopsis with 56.19% of identity
• Blastx: Heterogeneous nuclear ribonucleoprotein 1 from Arabidopsis with 54.69% of identity
• Eggnog: Rna-binding protein(ENOG410YA8Z)
• Kegg: Link to kegg annotations (AT4G14300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419013.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;