Ll_transcript_533431

• Id Trinity: TRINITY_DN50020_c0_g1_i6
• Name Transcript: Ll_transcript_533431
• Sequence: AAAAAAAAAAAAAAAAGAGGGCCTCTCGCCCTCTTTGCTTATTATGCTTTCTCTCAGATCTTAGATTTCATCACTTTCTCATTTGGGTTGTCTTCATTTG AATGGAAATGGACCCTGGCAAGCTTTTCATTGGGGGGATTTCCTGGGACACAAATGAAGACCGACTCAGACAATATTTCCAGAATTTTGGAGATGTAGTT GAAGCTGTTATAATGAAGGATCGGACCACAGGACGTGCCCGTGGTTTCGGGTTTATTGTTTTTGCTGATCCTTCTGTCGCTGAGCGAGTTGTTATGGAAA AGCATGTCATAGATGGAAGAACTGTTGAAGCAAAAAAGGCTGTCCCTAGAGATGATCAGAATATTCTGAACCGAAGCAGCAGCAGCAGTCATGGGTCTCC TGGTCCTACCCCTACCCGCACAAAGAAGATATTTGTTGGAGGTCTAGCATCCACAGTTACCGAGAGTGACTTTAAGAGTTACTTTGACCAGTTTGGAACA ATTACAGATGTTGTCGTGATGTATGACCATAATACTCAAAGGCCAAGAGGTTTTGGATTCATCACCTTTGATTCTGAGGATGGTGTTGAGAAGGTGCTCT ACAAAACTTTTCATGAATTGCATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCGAAGGAATTATCTCCAAGTCCAAGTAGAGCTCAGTTAGGTGGATA TAACTATGGTCTAAGTAGAGTTAGTAGCTTTGCTAATGGTTTTGTTCACGGATATAATCCAAGTCTGGTTGGAGGGAACGGACTTAGAATTGACGACAGA TTGAGTCCTGTTACTGTTGGTCGCAGTGGATATCCTCTTATGAGTCCTAATTATGGGTCGGGACTAAACCTCGAGGCACCATTGAGCCAACTTCTCTTAG GACGGGCATTGAACCCTTCATATAGTGGAAGTCCGAGCAGGTACGCTAATACCATAGGATATGCTGGTACAAATGTAGGCAACAATTCAACCATAAGTTC AGCAAATCAGAATTTGTGGGGGAACGGGAATCTTAACTATGCTACTAACCCTAGAAGCTCTGATTCTTTTGCTGGATATGGAAGCGGAAATTCAAACATG GGTTCTTTTGGTCAAATTGGGCCACTTTGGAATTCATCCCTTGGTATTGATCAAGCTGGAACAATTGGCTCTGGATATGGTAAGAGCAGTCTTAGTTATA GCTCTGGAGATGTGTTTTTAGGGTCAAAAGCAGTAGGTTATCGAAAAAGTCGGGAAAACATTGCTGCACCAGCTTCATCATATGCTGCTCTACCAAACGG AAGTTATGATGATGCGTACAATCACAAAGATAATACTTATGAGTCCGCTGGGTCATTCTATGGGGACCATACTTGGGGATCATCAACTTCAGAACTAACC GATGCTGGTTTTCTTGGTTTTGGCCTTGGAAATGCTGTTTCTGATTTAATGAGCAAAAGTTCCGGTGGCCACATTGAGGCTTATGCTGTTGCCAATACAC AACCAGATAGAGGTATTGCTGCCTAGGAAAGTTATGACATGGATTCTTAGATGTTTTAGTGAAGTATGACTGCTGCAGAATGCAAAAGATTGTGGAAAGT GTAATTTTTCTTGTTTCCATATGCTATAGTGCTTCAAGAATTTCATTAGAGCTAGTTGGTTTGGCTGTGTTGAATAACTTACAAATACAGAGAGCATTTA AAAGGGCTTTAACACTTATAAGGGTTGAGCTTTCAGTGAAACATAGATTTTCTTTGGGATTTTGAGACACTTTGTAACCAGGTTAGTGGAGTTTGTCATA ACTGTCATATGATGCATATCTCCAGTGACAAAAATACACACACACAAAAAAAGCAGACTTTCCTTTTCATTTCACATTTTCAAACTGTTCTATTTTTTTC TTTCTCAGTATTGTGATTTTTATGATTGTAAGAGATACATTGCTTACTTCTCTGATATTATTATCAAGGGATTTTCATCTGAGTTCTATAAAATAATAGC TGAATCATCTTCTACACAGTACAAATTTTTTCTTGTGCCG
• Tissue: pods
• Gene name: LI_gene_174031;
• Additional information: details;

Expression of Ll_transcript_533431

FPKM

• PAB: 4.7
• PNAB: 7.6
• PS1: 3.3
• PS2: 4
• PS3: 9.2
• PW1: 5
• PW2: 10.2
• PW3: 16.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_533431

• Blastp: Heterogeneous nuclear ribonucleoprotein 1 from Arabidopsis with 55.21% of identity
• Blastx: Heterogeneous nuclear ribonucleoprotein 1 from Arabidopsis with 54.69% of identity
• Eggnog: Rna-binding protein(ENOG410YA8Z)
• Kegg: Link to kegg annotations (AT4G14300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425874.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;