| Id Trinity | TRINITY_DN50024_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_533662 |
| Sequence | ATCACATCGTATTTATAGCAAAATTGAATTCATTTCATCCATCAGAATAGGAAAAAAAAACTTGGTCCTCGTATATATATTTTCTAAGCTTCACAAGGTG GCGATGCCTCCTTTGCACCTCAAACCCACCATGGACGAAGGAGGAGGAGGAGCAAAGAAGGCCAAAGCCAGAAAACCCAAACCCACTCTCCTCACCAATT CTCACGCGCTCCTCCACGCGACTATTCGAAAACCCTTCCTCAAACAAATACTTACTATATTCTTCCTCATCATCGCCTTCTACGTTCTCTACAACGCGTT CCTCAACCCCATCCTCCACACCACCGCCACCACAAAAAACCACGCCGTCAAAGTCTACCTCTACGATCTCCCCACCAGGTTCACCTACGGCATAATCCAC CACCACACGTTAGCGCGTGGCGGATCACGCGATGCCAGTGACGTGTCATCGCTCAAGTATCCCGGCCACCAGCACATGTCGGAATGGTATCTCTTTTCGG ATCTAGCCCGACCCGAATCCGAGCGCGTGGGGTCTCCAATCGTTAGGGTTTCTGATCCCGACGAAGCTGATTTGTTCTTCGTGCCGTTCTTTTCTTCCCT CAGCTTGATCGTGAACCCGGTTCGAGCGCCCGGTTCGGTTCAAGAGAAGGCTCCGGTTTATAGCGATGAGAAGAACCAGGAGGCGCTGGTGGAGTGGCTC GAGGGGCAGGAGTATTGGAAGAGGAACAATGGAAGAGACCATGTGCTTGTGGCTTCAGATCCGAATGCAATGTATCGAGTTATTGATCATGTTAAGAATT CAGTGTTGCTCGTTTCGGATTTTGGACGTGTTAGACCTGATCAGGGATCACTTGTGAAGGACGTGGTCGTGCCGTATTCGCATCGTATTCGATCGTATCA GGGTGATGTCAGCGTAGATAAGCGTGGGACATTGTTGTTTTTCATGGGAAATCGGTACCGCAAAGAGGGAGGGAAGGTTCGTGATACACTCTTTCAAATT CTAGAAAATGAAAAGGATGTAGTAGTAAAGCATGGAGCACAATCCAGAGAGAGTAGACGGGCAGCTTCCCAAGGAATGCATACATCAAAGTTCTGTTTAC ATCCTGCAGGAGATACTCCATCAGCCTGCCGACTGTTTGATGCTATAGTTAGCTTGTGCATTCCAGTGATTGTCAGTGATAATATCGAGTTGCCTTTTGA AGATACAATAGACTATAGAAAGATATCTGTGTTTGTAGAGACTGCTTCTGCTATAAAGCCAGGATTTTTGGTATCAAAGTTGAGAGCAGTTACTGCAGAT AGGATCCTGGAATATCAGAAAGAACTGAAAGAGGTGAAGCGATACTTTGAATATGACGAGCCGGATGGGACAGTTAATGAGATTTGGCGCCAAGTTTCAA AAAAGCTACCGTTGATTAAACTAATGATCAACCGTGATAAAAGGCTGGTTAAAAAGGAACCTGACTGCTCTTGCATATGTGTAAACCAGACTGCCCTGAG ATGAGAACTTATAGAAATTTACTCACACGGACAGGTTTGACCATTATATTAAGAAAATTTTAGGTGCTTTCTCGAATGTGTAACACTTTAGCTATATTGG TCATCATTGTCTGTCTCTCGCATTAATGACTGATGTTATAACTTAAGTGTGACACGGTTAATGGCGTAAGCATTACCGGAATTCTCTTCCATGACTGTGG CTCAGTTTGGTCTGGACATTTCTGAGGCTGAGGAGCTGACAACATTTAATTAATTCATCCTGCCACTGGAGGTTGTGTATATCTTTTAAGTACTTGTTAC TTAAATGGGGTTAGAATATACCTTGTAGAAATCACACGGCTGATAAATTTATACATTGAGACCAGGCTTAGAAAGAAAGTCTGAGCTGTACCATGTACAG TATAAAGAATAAAATCATGATAATTTTTAATTTGTAACATGTTCCTTTTTTTGGTTATTTTTCTGTTTGTATTTAATAGGGCATCTCAAAACCATTTTAT GTGTCCGCGCTTATATCATTTGACAGTTTTTCCTTATTGCTTGAACATGTCATATTGAGCATTGTGAGTAACAGGTTTCAAACCCTTTCCATATTCACCA ACTGATTTCAATGTTTGGCCGAAGAATAATGGACTTCTTACCAATTTAAGTGATAAAGCAATGAAGATATTAAAAAGAATACTTGAACGATATTATGATA TACTGTAGAACCATTCAACGACTTGCAAACTTCAGAGTAACCAAGGGGAATGTTACAGTTCTTAAAATTGTGATTTTAACATAGTGAGAAATAACCTATA AACCTAAAGTAATCTCTCTTTCCCCTTTTGCAACAATTCTTCATGTCATTTGTGAGTAGTACCTTCATCACAAATGATAAAAGAAGCACTCTACACTCAA TTTCACCATGGTATGATATGATCGATAATCTTTACTTCTACAACAGGGTTTACTGGCCTCTTGCTAAACTTACATTTCATATATTTCATCTTACTTCAAC TTATATGTATTTTTTAAACTTTGTTTCCACATTTCTAACTAAGCTAAATAAAAATATCATTTAAGTCACGATTAGCTAGAAATATGTAACTATGCTTTGA ACCTTATTAAATAGAAGCACATTTATTGTGTGTGGACGGTGCTTCCAAATTACAAAAGATTCATGAATGACCTTGTGATATAGCCATCAGCCTATCAAGT TCTCTGGTTTTGAATTCATTTTGACTATACATACATCATCACAAATTGGAAATTGAGTACATTGATGAAAAATGACAAATTTTGTTCTGCATGTTCCTGC TATCTTTGGGCGCTTCACTGTGTCTGCTTCATCCAACTCCAATGGTGTCTCTCGTGGTGGTGGTCCAATGATAGTGGAGCTTCCATTAGAGAAGATAAGA AGGCCTATGTTGAGGACAAGAACAAATGATCCTGACAAAGTTCAACAACTCATGGACAGTGTCTCTGAAATTGGTCTTCAAGTCCCTGTAAGCACTTTCT TCCTTTTTGTAAATTTTTGTTTATTGTTTTGTATACATTTTGGTGTTTAAATATAAGGATGGCAATAGGGCCGTGCGGATGCGGGTAGTGTTTTCCCATT CCTAAATCCGTACTATTTGTGGGTTTCTGCGAGTACTCAACGGGTTTTTAGTACTTGTGAAAAAATGAATAAGGGATGGAAGGGTATTGGTTTTTAACTT TTTATGTGTTATTGTGGTCCATTAGATGTTGGTGTCTTAGATGAATTCACTGTTTTATTTGCTGTTTAAGTTTTTTCTTTTCAACTGGATAAGGTATGAG AATACAGAAAATGTATTGAATAATTGAAATACAACTACTGAAGTGTTTTATGGCCTTATTGGAGAAATAATTTTCATGACAAGTTGGAATAGCATTATTT GCTTTGCATAGTAAACAAGTCATGGGTATTATTTGTGCCAATTCTGATGGTGTAACCAGCTTTGTCAATATCCTGAGAAAGATTATTGGCTGTGTAGGCT GCATCCATTATAAAACACCTTGAGTGGAATTGTGAATTTTGTAGTTATGATTCATCTGTCTCATTAAGTAAATTTATGATTCATCAAAACACTGCTCAGC TGCTGATATGAGTTCCTTTTAAGTGACACAGATTGATGTCCTCGAGGTCGATGGAATCTATTACGGTATGAACTTTTCTGTATCGTGCATGGACTCTAAT CTTTCGAAGTACTTATATTTTTGAATTATCTATTCCTTTCATGGAAACTTACTAGGAAAGTTCTTAAGCACTTGTGTTACTGTTCTGCAATCAGAATATA AAATGCATATTATTTTATCTCATGGATGATGTTTCATGGAAGGCTGGCTACTAAAGAAAGGCTGTATAAGTTTGGTCTAATTACGGAAACAGTGTTTAGT TTTCGGCTTTTCGCAAGCAAGAGGAGGAAAGTTTTGAACATTTAATGTTCCAATGCCAGTATACATAGGAAGTATTACATAGTGTTATGTCATGGTTACA TTTTTCAATTGGTGCAAAAAGATTACAAACATAGGAACACATTTTTTCAGCTAAAGAACACAGAGAGACTAGTTTTCAAGTTAAGGACAGCTGCATTTTT TGGATGCATATAACAGATTTGGAGGTGCAGAAACTCTATGGTGTTTAAAGATTCGTATATTATCCCGGAGAGAGATATAGATATAGTGATAAATAATCTG AGGATGAGATTGAAAACTATATTCATAGATGATAGTAGACAAACTAGAAGCATAGGCAAGAGATTGAATATCACTTAATCTCATTATGTGAAGTTATGGA CATGGGGTATGCCCTTAGATGATATAATATATGACTTCTGGAAAATAAATCACAAGGAGGATTAAAATCGGAAAGATTTGCGTTACTTTTGATTTGTAGG TTTCTCCGGCTGTCACCGCTATGAAGCTCACCAGCGCCTTGGACTCCCTACCATCCGTTGTAAAATACGGCGTGGCACGAAAGAGACTCTAAGGCATCAT ATGCGCTGAACATATATATATTCACCTTATATAATTCAAAGTTGGTGCATGCCATTAGTGTATCCATTCCAAGTAAAGATTGAAGTCTCTTGCTTCTGAA GCTAGTGTTATTGGTGGTTTACATATTTACTTTATGGGAAATGTATCGTTAGTGTAGTGTTTTATAGTTAGTAACATATATATTATATTGAATAAGTTGA ATACTCATAATGTATTTCGATGATTGAGGAATATCTATCCTCTACACTACTTTTAATTCTCTAAAAATACAACTGATATCAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_174063; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_533662
| Blastp | Probable arabinosyltransferase ARAD1 from Arabidopsis with 69.33% of identity |
|---|---|
| Blastx | Probable arabinosyltransferase ARAD1 from Arabidopsis with 69.33% of identity |
| Eggnog | Exostosin(ENOG410XTFH) |
| Kegg | Link to kegg annotations (AT2G35100) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421941.1) |
| Pfam | Exostosin family (PF03016.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |