| Id Trinity | TRINITY_DN50024_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_533676 |
| Sequence | GGAGTATCTCCTGCAGGATGTAAACAGAACTTTGATGTATGCATTCCTTGGGAAGCTGCCCGTCTACTCTCTCTGGATTGTGCTCCATGCTTTACTACTA CATCCTTTTCAAATTCTAGAAAATGAAAAGGATGTAGTAGTAAAGCATGGAGCACAATCCAGAGAGAGTAGACGGGCAGCTTCCCAAGGAATGCATACAT CAAAGTTCTGTTTACATCCTGCAGGAGATACTCCATCAGCCTGCCGACTGTTTGATGCTATAGTTAGCTTGTGCATTCCAGTGATTGTCAGTGATAATAT CGAGTTGCCTTTTGAAGATACAATAGACTATAGAAAGATATCTGTGTTTGTAGAGACTGCTTCTGCTATAAAGCCAGGATTTTTGGTATCAAAGTTGAGA GCAGTTACTGCAGATAGGATCCTGGAATATCAGAAAGAACTGAAAGAGGTGAAGCGATACTTTGAATATGACGAGCCGGATGGGACAGTTAATGAGATTT GGCGCCAAGTTTCAAAAAAGCTACCGTTGATTAAACTAATGATCAACCGTGATAAAAGGCTGGTTAAAAAGGAACCTGACTGCTCTTGCATATGTGTAAA CCAGACTGCCCTGAGATGAGAACTTATAGAAATTTACTCACACGGACAGGTTTGACCATTATATTAAGAAAATTTTAGGTGCTTTCTCGAATGTGTAACA CTTTAGCTATATTGGTCATCATTGTCTGTCTCTCGCATTAATGACTGATGTTATAACTTAAGTGTGACACGGTTAATGGCGTAAGCATTACCGGAATTCT CTTCCATGACTGTGGCTCAGTTTGGTCTGGACATTTCTGAGGCTGAGGAGCTGACAACATTTAATTAATTCATCCTGCCACTGGAGGTTGTGTATATCTT TTAAGTACTTGTTACTTAAATGGGGTTAGAATATACCTTGTAGAAATCACACGGCTGATAAATTTATACATTGAGACCAGGCTTAGAAAGAAAGTCTGAG CTGTACCATGTACAGTATAAAGAATAAAATCATGATAATTTTTAATTTGTAACATGTTCCTTTTTTTGGTTATTTTTCTGTTTGTATTTAATAGGGCATC TCAAAACCATTTTATGTGTCCGCGCTTATATCATTTGACAGTTTTTCCTTATTGCTTGAACATGTCATATTGAGCATTGTGAGTAACAGGTTTCAAACCC TTTCCATATTCACCAACTGATTTCAATGTTTGGCCGAAGAATAATGGACTTCTTACCAATTTAAGTGATAAAGCAATGAAGATATTAAAAAGAATACTTG AACGATATTATGATATACTGTAGAACCATTCAACGACTTGCAAACTTCAGAGTAACCAAGGGGAATGTTACAGTTCTTAAAATTGTGATTTTAACATAGT GAGAAATAACCTATAAACCTAAAGTAATCTCTCTTTCCCCTTTTGCAACAATTCTTCATGTCATTTGTGAGTAGTACCTTCATCACAAATGATAAAAGAA GCACTCTACACTCAATTTCACCATGGTATGATATGATCGATAATCTTTACTTCTACAACAGGGTTTACTGGCCTCTTGCTAAACTTACATTTCATATATT TCATCTTACTTCAACTTATATGTATTTTTTAAACTTTGTTTCCACATTTCTAACTAAGCTAAATAAAAATATCATTTAAGTCACGATTAGCTAGAAATAT GTAACTATGCTTTGAACCTTATTAAATAGAAGCACATTTATTGTGTGTGGACGGTGCTTCCAAATTACAAAAGATTCATGAATGACCTTGTGATATAGCC ATCAGCCTATCAAGTTCTCTGGTTTTGAATTCATTTTGACTATACATACATCATCACAAATTGGAAATTGAGTACATTGATGAAAAATGACAAATTTTGT TCTGCATGTTCCTGCTATCTTTGGGCGCTTCACTGTGTCTGCTTCATCCAACTCCAATGGTGTCTCTCGTGGTGGTGGTCCAATGATAGTGGAGCTTCCA TTAGAGAAGATAAGAAGGCCTATGTTGAGGACAAGAACAAATGATCCTGACAAAGTTCAACAACTCATGGACAGTGTCTCTGAAATTGGTCTTCAAGTCC CTGTAAGCACTTTCTTCCTTTTTGTAAATTTTTGTTTATTGTTTTGTATACATTTTGGTGTTTAAATATAAGGATGGCAATAGGGCCGTGCGGATGCGGG TAGTGTTTTCCCATTCCTAAATCCGTACTATTTGTGGGTTTCTGCGAGTACTCAACGGGTTTTTAGTACTTGTGAAAAAATGAATAAGGGATGGAAGGGT ATTGGTTTTTAACTTTTTATGTGTTATTGTGGTCCATTAGATGTTGGTGTCTTAGATGAATTCACTGTTTTATTTGCTGTTTAAGTTTTTTCTTTTCAAC TGGATAAGGTATGAGAATACAGAAAATGTATTGAATAATTGAAATACAACTACTGAAGTGTTTTATGGCCTTATTGGAGAAATAATTTTCATGACAAGTT GGAATAGCATTATTTGCTTTGCATAGTAAACAAGTCATGGGTATTATTTGTGCCAATTCTGATGGTGTAACCAGCTTTGTCAATATCCTGAGAAAGATTA TTGGCTGTGTAGGCTGCATCCATTATAAAACACCTTGAGTGGAATTGTGAATTTTGTAGTTATGATTCATCTGTCTCATTAAGTAAATTTATGATTCATC AAAACACTGCTCAGCTGCTGATATGAGTTCCTTTTAAGTGACACAGATTGATGTCCTCGAGGTCGATGGAATCTATTACGGTATGAACTTTTCTGTATCG TGCATGGACTCTAATCTTTCGAAGTACTTATATTTTTGAATTATCTATTCCTTTCATGGAAACTTACTAGGAAAGTTCTTAAGCACTTGTGTTACTGTTC TGCAATCAGAATATAAAATGCATATTATTTTATCTCATGGATGATGTTTCATGGAAGGCTGGCTACTAAAGAAAGGCTGTATAAGTTTGGTCTAATTACG GAAACAGTGTTTAGTTTTCGGCTTTTCGCAAGCAAGAGGAGGAAAGTTTTGAACATTTAATGTTCCAATGCCAGTATACATAGGAAGTATTACATAGTGT TATGTCATGGTTACATTTTTCAATTGGTGCAAAAAGATTACAAACATAGGAACACATTTTTTCAGCTAAAGAACACAGAGAGACTAGTTTTCAAGTTAAG GACAGCTGCATTTTTTGGATGCATATAACAGATTTGGAGGTGCAGAAACTCTATGGTGTTTAAAGATTCGTATATTATCCCGGAGAGAGATATAGATATA GTGATAAATAATCTGAGGATGAGATTGAAAACTATATTCATAGATGATAGTAGACAAACTAGAAGCATAGGCAAGAGATTGAATATCACTTAATCTCATT ATGTGAAGTTATGGACATGGGGTATGCCCTTAGATGATATAATATATGACTTCTGGAAAATAAATCACAAGGAGGATTAAAATCGGAAAGATTTGCGTTA CTTTTGATTTGTAGGTTTCTCCGGCTGTCACCGCTATGAAGCTCACCAGCGCCTTGGACTCCCTACCATCCGTTGTAAAATACGGCGTGGCACGAAAGAG ACTCTAAGGCATCATATGCGCTGAACATATATATATTCACCTTATATAATTCAAAGTTGGTGCATGCCATTAGTGTATCCATTCCAAGTAAAGATTGAAG TCTCTTGCTTCTGAAGCTAGTGTTATTGGTGGTTTACATATTTACTTTATGGGAAATGTATCGTTAGTGTAGTGTTTTATAGTTAGTAACATATATATTA TATTGAATAAGTTGAATACTCATAATGTATTTCGATGATTGAGGAATATCTATCCTCTACACTACTTTTAATTCTCTAAAAATACAACTGATATCAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_174063; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_533676
| Blastp | Probable arabinosyltransferase ARAD1 from Arabidopsis with 70.35% of identity |
|---|---|
| Blastx | Probable arabinosyltransferase ARAD1 from Arabidopsis with 70.35% of identity |
| Eggnog | Exostosin(ENOG410XTFH) |
| Kegg | Link to kegg annotations (AT2G35100) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421941.1) |
| Pfam | Exostosin family (PF03016.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |