Ll_transcript_533679

• Id Trinity: TRINITY_DN50024_c0_g1_i12
• Name Transcript: Ll_transcript_533679
• Sequence: ATCACATCGTATTTATAGCAAAATTGAATTCATTTCATCCATCAGAATAGGAAAAAAAAACTTGGTCCTCGTATATATATTTTCTAAGCTTCACAAGGTG GCGATGCCTCCTTTGCACCTCAAACCCACCATGGACGAAGGAGGAGGAGGAGCAAAGAAGGCCAAAGCCAGAAAACCCAAACCCACTCTCCTCACCAATT CTCACGCGCTCCTCCACGCGACTATTCGAAAACCCTTCCTCAAACAAATACTTACTATATTCTTCCTCATCATCGCCTTCTACGTTCTCTACAACGCGTT CCTCAACCCCATCCTCCACACCACCGCCACCACAAAAAACCACGCCGTCAAAGTCTACCTCTACGATCTCCCCACCAGGTTCACCTACGGCATAATCCAC CACCACACGTTAGCGCGTGGCGGATCACGCGATGCCAGTGACGTGTCATCGCTCAAGTATCCCGGCCACCAGCACATGTCGGAATGGTATCTCTTTTCGG ATCTAGCCCGACCCGAATCCGAGCGCGTGGGGTCTCCAATCGTTAGGGTTTCTGATCCCGACGAAGCTGATTTGTTCTTCGTGCCGTTCTTTTCTTCCCT CAGCTTGATCGTGAACCCGGTTCGAGCGCCCGGTTCGGTTCAAGAGAAGGCTCCGGTTTATAGCGATGAGAAGAACCAGGAGGCGCTGGTGGAGTGGCTC GAGGGGCAGGAGTATTGGAAGAGGAACAATGGAAGAGACCATGTGCTTGTGGCTTCAGATCCGAATGCAATGTATCGAGTTATTGATCATGTTAAGAATT CAGTGTTGCTCGTTTCGGATTTTGGACGTGTTAGACCTGATCAGGGATCACTTGTGAAGGACGTGGTCGTGCCGTATTCGCATCGTATTCGATCGTATCA GGGTGATGTCAGCGTAGATAAGCGTGGGACATTGTTGTTTTTCATGGGAAATCGGTACCGCAAAGAGGGAGGGAAGGTTCGTGATACACTCTTTCAAATT CTAGAAAATGAAAAGGATGTAGTAGTAAAGCATGGAGCACAATCCAGAGAGAGTAGACGGGCAGCTTCCCAAGGAATGCATACATCAAAGTTCTGTTTAC ATCCTGCAGGAGATACTCCATCAGCCTGCCGACTGTTTGATGCTATAGTTAGCTTGTGCATTCCAGTGATTGTCAGTGATAATATCGAGTTGCCTTTTGA AGATACAATAGACTATAGAAAGATATCTGTGTTTGTAGAGACTGCTTCTGCTATAAAGCCAGGATTTTTGGTATCAAAGTTGAGAGCAGTTACTGCAGAT AGGATCCTGGAATATCAGAAAGAACTGAAAGAGGTGAAGCGATACTTTGAATATGACGAGCCGGATGGGACAGTTAATGAGATTTGGCGCCAAGTTTCAA AAAAGCTACCGTTGATTAAACTAATGATCAACCGTGATAAAAGGCTGGTTAAAAAGGAACCTGACTGCTCTTGCATATGTGTAAACCAGACTGCCCTGAG ATGAGAACTTATAGAAATTTACTCACACGGACAGTGGAGCTTCCATTAGAGAAGATAAGAAGGCCTATGTTGAGGACAAGAACAAATGATCCTGACAAAG TTCAACAACTCATGGACAGTGTCTCTGAAATTGGTCTTCAAGTCCCTGTAAGCACTTTCTTCCTTTTTGTAAATTTTTGTTTATTGTTTTGTATACATTT TGGTGTTTAAATATAAGGATGGCAATAGGGCCGTGCGGATGCGGGTAGTGTTTTCCCATTCCTAAATCCGTACTATTTGTGGGTTTCTGCGAGTACTCAA CGGGTTTTTAGTACTTGTGAAAAAATGAATAAGGGATGGAAGGGTATTGGTTTTTAACTTTTTATGTGTTATTGTGGTCCATTAGATGTTGGTGTCTTAG ATGAATTCACTGTTTTATTTGCTGTTTAAGTTTTTTCTTTTCAACTGGATAAGGTATGAGAATACAGAAAATGTATTGAATAATTGAAATACAACTACTG AAGTGTTTTATGGCCTTATTGGAGAAATAATTTTCATGACAAGTTGGAATAGCATTATTTGCTTTGCATAGTAAACAAGTCATGGGTATTATTTGTGCCA ATTCTGATGGTGTAACCAGCTTTGTCAATATCCTGAGAAAGATTATTGGCTGTGTAGGCTGCATCCATTATAAAACACCTTGAGTGGAATTGTGAATTTT GTAGTTATGATTCATCTGTCTCATTAAGTAAATTTATGATTCATCAAAACACTGCTCAGCTGCTGATATGAGTTCCTTTTAAGTGACACAGATTGATGTC CTCGAGGTCGATGGAATCTATTACGGTATGAACTTTTCTGTATCGTGCATGGACTCTAATCTTTCGAAGTACTTATATTTTTGAATTATCTATTCCTTTC ATGGAAACTTACTAGGAAAGTTCTTAAGCACTTGTGTTACTGTTCTGCAATCAGAATATAAAATGCATATTATTTTATCTCATGGATGATGTTTCATGGA AGGCTGGCTACTAAAGAAAGGCTGTATAAGTTTGGTCTAATTACGGAAACAGTGTTTAGTTTTCGGCTTTTCGCAAGCAAGAGGAGGAAAGTTTTGAACA TTTAATGTTCCAATGCCAGTATACATAGGAAGTATTACATAGTGTTATGTCATGGTTACATTTTTCAATTGGTGCAAAAAGATTACAAACATAGGAACAC ATTTTTTCAGCTAAAGAACACAGAGAGACTAGTTTTCAAGTTAAGGACAGCTGCATTTTTTGGATGCATATAACAGATTTGGAGGTGCAGAAACTCTATG GTGTTTAAAGATTCGTATATTATCCCGGAGAGAGATATAGATATAGTGATAAATAATCTGAGGATGAGATTGAAAACTATATTCATAGATGATAGTAGAC AAACTAGAAGCATAGGCAAGAGATTGAATATCACTTAATCTCATTATGTGAAGTTATGGACATGGGGTATGCCCTTAGATGATATAATATATGACTTCTG GAAAATAAATCACAAGGAGGATTAAAATCGGAAAGATTTGCGTTACTTTTGATTTGTAGGTTTCTCCGGCTGTCACCGCTATGAAGCTCACCAGCGCCTT GGACTCCCTACCATCCGTTGTAAAATACGGCGTGGCACGAAAGAGACTCTAAGGCATCATATGCGCTGAACATATATATATTCACCTTATATAATTCAAA GTTGGTGCATGCCATTAGTGTATCCATTCCAAGTAAAGATTGAAGTCTCTTGCTTCTGAAGCTAGTGTTATTGGTGGTTTACATATTTACTTTATGGGAA ATGTATCGTTAGTGTAGTGTTTTATAGTTAGTAACATATATATTATATTGAATAAGTTGAATACTCATAATGTATTTCGATGATTGAGGAATATCTATCC TCTACACTACTTTTAATTCTCTAAAAATACAACTGATATCAAT
• Tissue: pods
• Gene name: LI_gene_174063;
• Additional information: details;

Expression of Ll_transcript_533679

FPKM

• PAB: 0.6
• PNAB: 0
• PS1: 0.1
• PS2: 0
• PS3: 1
• PW1: 0.5
• PW2: 0.8
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_533679

• Blastp: Probable arabinosyltransferase ARAD1 from Arabidopsis with 69.33% of identity
• Blastx: Probable arabinosyltransferase ARAD1 from Arabidopsis with 69.33% of identity
• Eggnog: Exostosin(ENOG410XTFH)
• Kegg: Link to kegg annotations (AT2G35100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421941.1)
• Pfam: Exostosin family (PF03016.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;