Ll_transcript_533390

Id TrinityTRINITY_DN50036_c3_g1_i8
Name TranscriptLl_transcript_533390
SequenceGTCGCAGAGTAAAGCCTCCAACTTTGTGATCCTTTCTCAGTTACCCACCTTACCCAAAACCTTCAAGCATTGCCTCCACTGAATGATGTTATGGCACAGA ATTTGAATATACTGAGAAGGGTTTTGGCCTATAGAATCTTGAACCATTTCTATGCTAACCATTTATCATGTCCTGCAAGATATTTTGCTCATGCTTCTTA TTCAACCACTGATTTTAGAGTTCAATCTGAGGGTAGTTGTAACATTAGAAATATCAATGATAAAAATGATGGTTTTAGGAAAGTGGGTTCTGGGTTTCAA GGGGATTTAAGTTTTGGTGCAAGTATCAATTATGATGTAGAAGATGAGGGTGATGGTGATGAAGTTGGTGAAGAAGAGGGTTCTAGTGATGATGAAAGTA TTGAGCTTATCGGTTCCTTTCGTGGAAATCACAAACAGAGAGAAAATATTGCAAGAGTTGAGATTGATGAAAATGAATTTAGACACCCTTTGGTGAAGGA GGTTTGTAGGTTAATAACTCTCAGGTCTGCTTGGAACCCTAATCTTGAAGGACAATTGAGGCATGTATTAAGAAGCCTCAAGCCCCCACATGTTTGCGCC ATTTTGCGCTCACAAGTTGATGAACGGGTTGCTTTGAATTTTTTCTATTGGGCTGATCGGCAGTGGCGCTACAAACACAACACTATTGTTTACTATACAC TGTTAGATGTCCTAAGCAAGACTAAACTGTGCCAGGGTGCTAGGCGGATTCTTCGCCTTATGACCCGCCGGGGAATTGAATGCCCACCTGAAGTTTTTGG CTATGTAATGGTATCTTATAGTCGTGCAGGGAAGTTGAGGAATGCCTTGAGAATTTTGACCTTGATGCAGAAAGCTGGAGTTGAACCTAATTTATCTATA TGTAATACTGCCATCTATGTGTTGGTGAAGGGAAATAAATTGGAAAAGGCTCTGAGATTCTTGGAACGAATGCAGATTACTGGAATCGAACCTGACATTG TAACTTATAATTGTTTGATCAAGGGTTACTGTGATTTACATCGGAGTGAAGATGGATTGAAGCTTATTGCAGAAATGCCGTCTAAGGGTTGCCTTCCTGA TAAAGTAAGTTATTATACCGTGATGGTTTACTTCTGTAAGGATAAAAAAATTGAAGAGGTGAAGCAGTTAATGAAAAGCATGGTTTCGGATAGTACATTA ATACCAGATCAGGTTACGTATAATACACTTATCCACACGCTTTCAAAGCATGGGCATGCTGATGATGCTCTTAATTTCTTGAGGGAAGCAGAAGACAAAG GTTTCCACATCGATAAGGTTGGGTACAGTGCAATAGTTCACTCCTTCTGTAAGGAGGGGAGGATGGACGAGGCAAAGAGTTTAGTGAACAATATGTACTC AAGGGGTTGTATTCCTGATGTGGTGACATATACTGCTATTATCAACGGATTTTGTCGCACGAGGAAGATAGATGAAGCGAAAAGGATGCTGCAGCAGATG TATAAACATGGGTGCAAGCCAAATACTGTTTCTTATACAGCTTTGTTGAATGGCCTCTGTCACAATGGAAAATCATTAGAGGCAAGGGAAATGATAAAGG TAAGTGAGGAGCATTGGTGGACCCCAAATGCTATCACATATAGTGCTGTGATGCATGGGCTCCGTAGGGAGGGAAGATTGTTCGAAGCCTGTGAATTGAT TAGGGAAATGGTTGAAAAGGGTTTTTTTCCAACACCAGTTGAAATTAACCAGCTAATACAGTCTTTCTGTCGAAATAAGGAAGTGGTAGAAGCTAAATTA TTTTTACAAGAATGTCTGAATAAGGGCTGTGCCGTCAATGTTGTAAACTTTACTACTGTAATTCATGGTTTTTGTCAGACTGATGACTTGGAAGCTGCTC TATCGATGCTAGATGACATGTATTTAAGCAATAAACATCCTGATGCAGTCACGTACACAGCACTGGTTGATGCATTGGGGAAGAAAGGTAGATTGGACAT GGCTTCTGAGTTGATCATCAAGATGCTCAGCAAAGGTTTGGATCCTACTCCTGTAACATACCGGACAGTCATACACCGTTATTGTCAATGGGGTAGAGTG GGTGAGATGTTGAAATTATTGGAAAAAATGCTTGTTAGGCAGCCGTTTGGAACAGTATACAATCAGGTTATCGAGAAACTTTGTGCTTTTGGAAACCTTG AAGAGGCCGACAAGCTTCTAGGTGAGGTTTTGAGAACAGCATCGAAAGTTGATGCTAATACATGCCATGTTCTGATGGAAAGCTATCTGACTAAAGGGGT CGCTCTGTCAGCATATAAAGTGGCGTGTCGGATGTTCAGCCGGAATTTGATTCCAGATTTAAAGCTCTGTGAGAAAGTGAGCAAGAAACTGATGTTAGAA GGGAAGTTGGTGGAGGCAGATAACCTTATGATACGACTTGTTGAACGCGGAATACAACAAAATGAGATACATAGCGAAGTTAGCCGCTATTCTAAGCTTA AAAGTTAAAGAATGGTCATGCTTATCATTTTCCTATGTTGGCAATCCATCTTCAGCTCTAAAAAGAGCTATAAATGTAGGGATAAGCCTTTATCAATTTC AAGTTCATTTCCAGATTTCTCTCTTTTATGGTTACAATGATATGCATAGCATTTTCCCATCATCTATTAAGAAATGTAATGTGAAAAGGAATTTAGGACT AGGATTGTCATTTTATATTGTTTAGATGAATTGATATTTGATAAAAGAGACAAAATGAATGCATTGTTTAAAGAAGTACAGCAATCAGGTGTTATGATAA TTGTAACCAGTTACATCACAATTAGATTGATGTTATACATTGCTTCAAGCATTGCAATGACCATCAAGTTAGTGCTAAGCAGATACATTAAGTTTTTGGA TGAATCACATGCTTGAGGTACATAGAGTGATACAAGTTATGAAGAAATGATGATGGACTCTCAAATGTTATTTGAAGTGGACTATATAGCAGAAGGTCCA TGATGCTTATGGTATATTATTAATTGATTATTAGTTGAATGTTAACATATTC BLAST
Tissuepods
Gene nameLI_gene_174186; 
Additional informationdetails; 

Expression of Ll_transcript_533390

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_533390
BlastpPentatricopeptide repeat-containing protein At5g39710 from Arabidopsis with 28.74% of identity
BlastxPentatricopeptide repeat-containing protein At5g39710 from Arabidopsis with 29.13% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT5G39710)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019439669.1)
PfamPPR repeat (PF01535.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;