Id Trinity | TRINITY_DN50048_c2_g1_i12 |
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Name Transcript | Ll_transcript_532753 |
Sequence | AGACTTTTGAGTGCTACAATTTTTGTTTATTATTATTATTATTATTATTTTTATTTTCTCTATTATTATATAGTTGCTGTTACTATTATTAATTAATTTG TGGTGAGTGAGCGAGAGAGAGAGATTGGCGCTTTAAATTTTCTCTCAGATTCTGAATACCTAAAATCTAGGGTTTTATTGTTCTTCCCGGGTAAGTGAGT AATTTGATTTTCCTTTTATTAGTTTAAAAAAAATGATTTTGGGATTAAGTTCGTTTGCGTGATTCGTTTCTCTCTGATGCTCTTTTGAAATTAGGGTTTT TGTTATTGCTCTTGAGGTGAGAATCATGAGTTTTTTAAATCATCTGGGTCGAATAATTCTGTCTCTGCATGGCTTTTGGCCTTTTTCTGAGGAAATTAAA CCCTAATTTTTTTGTGGTTGGAATTTCTTCGTGAGCTGGGGTTGCTTTTGGATTTAGCTCACAAATTTGGTGTTTGGTTTTCTGGTCGATAGTTATATTG CATGCTGGCTTGGTATTTCCTATGACTCTGTTTGGTTCTCTGAGTAATAAATATTGTTTTGAAAAAATATTAGGATTTGTTCTAGATTTTGTTTCTGTGG TTTTTTATTTAGCTATAGATATAGCTAATAATTGAAAGTTGTTCCCTTTCAAGAGTTGCAAGCAGTCTAGTATAAGGTAAAGTTTGTAAATAAACACCAG TTTTGTAAATTTTGGCTGTGACTAAGAAGTGTTCAGTTTCATTTTATGACGAATCATAATTAATTTCACTGAGGGTGTATTAATTTTCTTACATTGTGCA TTTTTTAAAATTATTGTAAATTTATTATCCTTTTAATGTGTTTCTTGTTTTTTTTAGACATTTGTATCGATCAGCTTTGTTTAAGCAGAATGAATAATGA ATGAAAGTTTTTCTAGGGATCTAAAGATATGCAGTCCAAGTCTGAAACAAATCCAACGAGGTCGGATCCACATTCCTTTCAACCTAACAATGTTTATGCT GAACCGTGGTGGCGTGGTATTGGGTACAATCCCATTGCCCAAACAATATCTGGGGCAAATGCAACCAAGTCATCCTCTCTTGATTGCCCTAATGGTGATT CAGAATCCAATGAAGGCCAGTCTTTGTCCAATAGTGGTTTGAATGAGGAAGATGATTCTGCTGCTAAAGATTCCCAACTTGCGGCTCCTAATCAAACAGA AAATTTTGGACATGAACAACAAGGGATGCAGCAAACTTCAGCACCTGCACCTTCTGTGCGTGAAGATGCCCATACCCAGACTCCGCAGCTGGAACTTGTT GGTCATTCAATTGCTTGTGCCACAAATCCTTATCAAGATCCATACTTTGGGGGCATGATGACAGCTTATGGACACCAGCAGTTGGGATATGCTCCTTTTA TGGGAATTCCACATGCAAGAATGCCTTTGCCTCTTGAGATGGCACAAGAGCCTGTTTATGTGAATGCTAAACAATACCAGGGAATTCTGAGGCGAAGACA GGCTCGTGCTAAGGCAGAACTTGAACGGAAGCTTATAAAAGCCAGAAAGGTACAAATCCACTAGACCTATGCATGTTTATGTATATTTCTATTTTTTTAC TATCGCAGTTGGGTGCTTCTTTATTAATTGGGCAGGTGATATCTAACCACTTTTAGGTGTGAGACGTTTGTTCTGCTCTGTTGCCTATTACTAAACTTAA CCTTATGACTCTCATATGAGCTAAAAGCTTTTGTTTTGTATGAATCTTCTCCCAAAATAAACTAGCAGAGCATATTTGCCTTCTTTTGGTGTGCTATAAA ATAAGTGGTTGGGAAATACAAGCAGTATAAGAGTAATTTTTCCTTTCCTTTGAGAGTGAATGAGAGATAGCCTTATTTGTCCAGGCAGTCTTCTCTACCT TCTTTACATTATGTCATCTGATAGTTGCTTAGTCTTAGTCCGGAAACCATTTTTAAAATATAGCAGTGGGCATGTGAAAAGGAAAAGTTTGTGAAAAATT GTTCTGTATTGCCTATTAAGAGAAAACAAGAGATTTGCTGACCTTGTAAGGACTCATGAACATATCCTTTCATATTTTGAGCCTTTGCCGCCTTTGCAGT AAGGTCTGCTACATCCATGACTTGCTGATTTAATGATGGAAAAAATGAGTCCACCTTTATTGCATTGGAATTGTTGATGGACCTTCATGAAATGATATCA CCCTATTGCTTAAAATCATATAAATTAAATATCAATTTACTATAAATAAATCAAAAATCCTAGTCGGGTCCTAATATCTATTTAAATTCACACTGAATAG CGCAACAGGTTTGATTTCTATGTTAAACAGATTTATGATTGGGATTTGTCTTGTGCTTAAACTGCAACTCTAGGGGATTTTTAACATGCTTAGTAGGAAT CGTTTTGCAATGAGATAAGTAAAAATGGGAAGCTCCATATGGTGAATGCAGAAGCATGTTAACTAGAATACTTTTGAGTTTGTAGTGAAACCTCAGTGAG GAAAAACTTCTAATTTAGTTTTGAAAGATTGCTATTGGAGACTGAACAAAGTCAGCCTTGTCTGTAAGAATTAGGTTCTAGAAAAATAAGCATGCAGATG TAGACGGTGGAAAATGGAAGTCATACAAGTTCACAAAGGTCAAGAAACTTATGACCTTTTAGCTTCTATAATAATTTTGATACATTAATTTATGATTCCA CTCTGATTTTGCGTCTGTATGCAATCACCTTTTAGAGCCATTTCATTAAAAATCATGAAAACAAAAGGGTTAAGGAGCTTATTTTCTCAATGTTTTGAAT GAAAAAGAATCTGATGCTATTAGTATTGCTGTCATGACTAATGTTAACTGTTTTTTTCATTCAATTCTCGTGTCCTCCTCTGGGCTTATGATAACATCTG TTTTGCACAGCCATATTTGCATGAATCTCGTCATCAGCATGCTATGAGAAGGGCAAGGGGTAGCGGAGGACGATTTGCAAAGAAATCTGATGCTGAGGCC TCCGGCAAGGAAAAGGATGCGGGTTCTGGTCCAGTCCTGTCATCACAGTCAATCAGTTCATCTGGTTCTGAACCTTTACCTTCTGATTCTGCCGAAACCT GGAATTCTCCAAATATGCTGCAACAAGATGCAAGAGGATCAAAAGCGCAAAGCAGGCTGGAAACACCCAATTATGAAAATGGCAGTGGTTCCTACCATAA TCCTAATGGCATGCAATCTTCAACTTATCATATGCACTCAGGTGAGAGAGGGGAGGAAGGCGACTGCTCCGGTCAGCAAAGGGGAACCATATCTTCCGAG CACGCCTCGCAGAGGCGTCTTGCTATACAGTAAAACCCCCCGGCATGGGGGATAGAGTTGCCAAGGTTGGTTTGTATCCTAGTGATATATTCTGTGAATA CCTTGGTTATCTGTCAACATTCTTGGCAAAATATATATGCCAAGCGGCAAATCATTCTTGGCTTTGTTCTTGTGTTTATGGTGTGAAAGGTATGATGGGG GAAAGAATGATGAATGAGATATGATTTCCTTTGAAGTTAAATCAATCTTTCATTCTTATCTCATTTTTGCATTTTGTACAGAACTATAGTGGTTAGTGAA CTCAATCCCAGATGCATGGTCAGATCAGAGATTTCAGAAGACTTTTGGAGAAATAAACTCTTGATGTACCAATTCTAGTTTCATGGGTTTTGTCTTATGT AACTCTTACCAGTTCATTTTTAACATTAGACATCATAGGGGAATGACATGAATTTAGTTACATTATATTAGTTTGCCTTGTGATTTAATTTTAGCATTCT AAATTTGGAGCCACATTTCTATCCCAAACTTTGTACCACTTCATATATTCAATGTTTCTCATTGGTTAGAAAAGTAAAACATGTATTAAATATATATTAA TTTTACATTTTCTAACCAATCAGAAATAGGGGGTATAAGATGATATACATTTTGGGATAGAAAATATACTCCCTCTACATTTCCATATTTTCACTAGCTA AACGGAAGATAAATAAGAAAACCATATTTTCTCTTTTCTCCACGACCCTTTATCCTTTGGGGAGAATATCTGCTGTCTCATTTTTTGTACCACTACATGT AACATCACTTCTAATTGGATGAAATTTTTTTATCTTAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_174269; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_532753
Blastp | Nuclear transcription factor Y subunit A-1 from Arabidopsis with 52.75% of identity |
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Blastx | Nuclear transcription factor Y subunit A-1 from Arabidopsis with 52.75% of identity |
Eggnog | Nuclear transcription factor Y(COG5224) |
Kegg | Link to kegg annotations (AT5G12840) |
CantataDB | Link to cantataDB annotations (CNT0002912) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430858.1) |
Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B (PF02045.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |