Ll_transcript_532754

• Id Trinity: TRINITY_DN50048_c2_g1_i13
• Name Transcript: Ll_transcript_532754
• Sequence: AGACTTTTGAGTGCTACAATTTTTGTTTATTATTATTATTATTATTATTTTTATTTTCTCTATTATTATATAGTTGCTGTTACTATTATTAATTAATTTG TGGTGAGTGAGCGAGAGAGAGAGATTGGCGCTTTAAATTTTCTCTCAGATTCTGAATACCTAAAATCTAGGGTTTTATTGTTCTTCCCGGGTAAGTGAGT AATTTGATTTTCCTTTTATTAGTTTAAAAAAAATGATTTTGGGATTAAGTTCGTTTGCGTGATTCGTTTCTCTCTGATGCTCTTTTGAAATTAGGGTTTT TGTTATTGCTCTTGAGGTGAGAATCATGAGTTTTTTAAATCATCTGGGTCGAATAATTCTGTCTCTGCATGGCTTTTGGCCTTTTTCTGAGGAAATTAAA CCCTAATTTTTTTGTGGTTGGAATTTCTTCGTGAGCTGGGGTTGCTTTTGGATTTAGCTCACAAATTTGGTGTTTGGTTTTCTGGTCGATAGTTATATTG CATGCTGGCTTGGTATTTCCTATGACTCTGTTTGGTTCTCTGAGTAATAAATATTGTTTTGAAAAAATATTAGGATTTGTTCTAGATTTTGTTTCTGTGG TTTTTTATTTAGCTATAGATATAGCTAATAATTGAAAGTTGTTCCCTTTCAAGAGTTGCAAGCAGTCTAGTATAAGGTAAAGTTTGTAAATAAACACCAG TTTTGTAAATTTTGGCTGTGACTAAGAAGTGTTCAGTTTCATTTTATGACGAATCATAATTAATTTCACTGAGGGTGTATTAATTTTCTTACATTGTGCA TTTTTTAAAATTATTGTAAATTTATTATCCTTTTAATGTGTTTCTTGTTTTTTTTAGACATTTGTATCGATCAGCTTTGTTTAAGCAGAATGAATAATGA ATGAAAGTTTTTCTAGGGATCTAAAGATATGCAGTCCAAGTCTGAAACAAATCCAACGAGGTCGGATCCACATTCCTTTCAACCTAACAATGTTTATGCT GAACCGTGGTGGCGTGGTATTGGGTACAATCCCATTGCCCAAACAATATCTGGGGCAAATGCAACCAAGTCATCCTCTCTTGATTGCCCTAATGGTGATT CAGAATCCAATGAAGGCCAGTCTTTGTCCAATAGTGGTTTGAATGAGGAAGATGATTCTGCTGCTAAAGATTCCCAACTTGCGGCTCCTAATCAAACAGA AAATTTTGGACATGAACAACAAGGGATGCAGCAAACTTCAGCACCTGCACCTTCTGTGCGTGAAGATGCCCATACCCAGACTCCGCAGCTGGAACTTGTT GGTCATTCAATTGCTTGTGCCACAAATCCTTATCAAGATCCATACTTTGGGGGCATGATGACAGCTTATGGACACCAGCAGTTGGGATATGCTCCTTTTA TGGGAATTCCACATGCAAGAATGCCTTTGCCTCTTGAGATGGCACAAGAGCCTGTTTATGTGAATGCTAAACAATACCAAGGAATTCTGAGGCGAAGACA AGCTCGTGCTAAGGCTGAACTTGAAAGGAAGCTAATAAAAGCTAGAAAGATAAAATTAAAACGGGAAACTCCTTACAGTGAATGCAGGAACATGTTAACC AGAATACTTTTGAACTAGTACTGGAGCATCATTGAGGAACACCTTCCAATTTAGTTTTGAAGGATTTGCTATTGGAGGCTGAAGGAAGCCCGCCTTGTCT GTAAGAATCCCACCA
• Tissue: pods
• Gene name: LI_gene_174269;
• Additional information: details;

Expression of Ll_transcript_532754

FPKM

• PAB: 1.3
• PNAB: 0.7
• PS1: 2.6
• PS2: 5.8
• PS3: 1.9
• PW1: 2.3
• PW2: 2.3
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_532754

• Blastp: Nuclear transcription factor Y subunit A-1 from Arabidopsis with 53% of identity
• Blastx: Nuclear transcription factor Y subunit A-1 from Arabidopsis with 52.45% of identity
• Eggnog: Nuclear transcription factor Y(COG5224)
• Kegg: Link to kegg annotations (AT5G12840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430858.1)
• Pfam: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B (PF02045.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;