Id Trinity | TRINITY_DN50048_c2_g1_i22 |
---|---|
Name Transcript | Ll_transcript_532763 |
Sequence | CCCACTCCCAACCTCCACTTTGTCCCTTTCACTCTAACCCCGCAGTCATCACTTCTCACACACTCTTCACCCCTTACCTGCTGTCACCGGTTCCTTTCTC TCCTTCTCCCCACCTCCGGTACCGTCACATCTGGTTCCCTCACACGTGTCTTCGCCGTATAACCGGCTGGACCCGTAGGGATCTAAAGATATGCAGTCCA AGTCTGAAACAAATCCAACGAGGTCGGATCCACATTCCTTTCAACCTAACAATGTTTATGCTGAACCGTGGTGGCGTGGTATTGGGTACAATCCCATTGC CCAAACAATATCTGGGGCAAATGCAACCAAGTCATCCTCTCTTGATTGCCCTAATGGTGATTCAGAATCCAATGAAGGCCAGTCTTTGTCCAATAGTGGT TTGAATGAGGAAGATGATTCTGCTGCTAAAGATTCCCAACTTGCGGCTCCTAATCAAACAGAAAATTTTGGACATGAACAACAAGGGATGCAGCAAACTT CAGCACCTGCACCTTCTGTGCGTGAAGATGCCCATACCCAGACTCCGCAGCTGGAACTTGTTGGTCATTCAATTGTAAGTCTTTGCCTTCATTGTTATTA CGTTTTTGACTTAAAGAGTCCTGTTGTAAATATAACCACTTTGTTCAATAGCATAAAGCTATGCTTAATTGCTTATTCTTGCATAACTTTTGGTGGACAT TCTATTATTATAGAACAGACTGTAGCTCCATGCTTTTGGAATGGATGGGACTTCTAACATTCTTTGATGCAGGCTTGTGCCACAAATCCTTATCAAGATC CATACTTTGGGGGCATGATGACAGCTTATGGACACCAGCAGTTGGGATATGCTCCTTTTATGGGAATTCCACATGCAAGAATGCCTTTGCCTCTTGAGAT GGCACAAGAGCCTGTTTATGTGAATGCTAAACAATACCAGGGAATTCTGAGGCGAAGACAGGCTCGTGCTAAGGCAGAACTTGAACGGAAGCTTATAAAA GCCAGAAAGGTACAAATCCACTAGACCTATGCATGTTTATGTATATTTCTATTTTTTTACTATCGCAGTTGGGTGCTTCTTTATTAATTGGGCAGGTGAT ATCTAACCACTTTTAGGTGTGAGACGTTTGTTCTGCTCTGTTGCCTATTACTAAACTTAACCTTATGACTCTCATATGAGCTAAAAGCTTTTGTTTTGTA TGAATCTTCTCCCAAAATAAACTAGCAGAGCATATTTGCCTTCTTTTGGTGTGCTATAAAATAAGTGGTTGGGAAATACAAGCAGTATAAGAGTAATTTT TCCTTTCCTTTGAGAGTGAATGAGAGATAGCCTTATTTGTCCAGGCAGTCTTCTCTACCTTCTTTACATTATGTCATCTGATAGTTGCTTAGTCTTAGTC CGGAAACCATTTTTAAAATATAGCAGTGGGCATGTGAAAAGGAAAAGTTTGTGAAAAATTGTTCTGTATTGCCTATTAAGAGAAAACAAGAGATTTGCTG ACCTTGTAAGGACTCATGAACATATCCTTTCATATTTTGAGCCTTTGCCGCCTTTGCAGTAAGGTCTGCTACATCCATGACTTGCTGATTTAATGATGGA AAAAATGAGTCCACCTTTATTGCATTGGAATTGTTGATGGACCTTCATGAAATGATATCACCCTATTGCTTAAAATCATATAAATTAAATATCAATTTAC TATAAATAAATCAAAAATCCTAGTCGGGTCCTAATATCTATTTAAATTCACACTGAATAGCGCAACAGGTTTGATTTCTATGTTAAACAGATTTATGATT GGGATTTGTCTTGTGCTTAAACTGCAACTCTAGGGGATTTTTAACATGCTTAGTAGGAATCGTTTTGCAATGAGATAAGTAAAAATGGGAAGCTCCATAT GGTGAATGCAGAAGCATGTTAACTAGAATACTTTTGAGTTTGTAGTGAAACCTCAGTGAGGAAAAACTTCTAATTTAGTTTTGAAAGATTGCTATTGGAG ACTGAACAAAGTCAGCCTTGTCTGTAAGAATTAGGTTCTAGAAAAATAAGCATGCAGATGTAGACGGTGGAAAATGGAAGTCATACAAGTTCACAAAGGT CAAGAAACTTATGACCTTTTAGCTTCTATAATAATTTTGATACATTAATTTATGATTCCACTCTGATTTTGCGTCTGTATGCAATCACCTTTTAGAGCCA TTTCATTAAAAATCATGAAAACAAAAGGGTTAAGGAGCTTATTTTCTCAATGTTTTGAATGAAAAAGAATCTGATGCTATTAGTATTGCTGTCATGACTA ATGTTAACTGTTTTTTTCATTCAATTCTCGTGTCCTCCTCTGGGCTTATGATAACATCTGTTTTGCACAGCCATATTTGCATGAATCTCGTCATCAGCAT GCTATGAGAAGGGCAAGGGGTAGTGGAGGACGTTTTGCAAAGAAATCTGATGTTGAGGCCTCTGGCAAGGATATGGGTTCTGGTCCTGTCCTGTCATCAC AATCAATCAGCTCATCTGGTTCTGAACCTTTACCTTCTGACTCTGCTGAAACCTTGAATTCTCCTAACATGCTGCAACAAGATGCAAGAGGATCAAAAGC ACACAGCAGGTTGGAAGCACCCAATTATGAAAATGGTAGTGACTCCTACCATAATCATAATGGTTTGCAATCTTCAACTTATCGTAAGCATTCAGGTGAA AGAGCAGAGGAAGGCGACTGTTCTGGTCAGCAAAGGGGAAGCATAGCTTCTGAGCATGCCTCACAGAGGTGTCTTGCTATACATTAGACTCCCGACGTAG GGGATAGAGATGTCAAGGTTGGTTAGTATCCAGTGATATATTTGGTGAATACATACGCCTTGGTTATCAGGCAAATCATTCTTGGCTTTTTGTTCTTGTG TTTATGGTGTGAGAGATATGGAGGAAAGAGTGATGATAGGGATGTGATTTCTTTTGGAACTCAAATCAATCATTGATTCTTATCTCAGTTTTGCATTTTG TACAGAATTATAGTGGTTAGTGAACTCAAAGCCCAGATAGGTGGCCAGATCATAGATTTGAGAAGACTTGTGGAGAAGTAAACTCTTGATGTACCAAATC TCGTTTAATGGGTTTTATCTTATGTAGCTCATATGTTAATTCTAACATGAGACATCATAGGATAGATTTTGTTACATTATATTTGTTTGCCTTGTGATTT TTATTTGTAGTGTTTTATTGGTTCTTTGAATTTAGTTACATTGGACTCCCGTAGGTAAAGATATATTCCCTGCATCTCTAGTTTGCCGGGATATTTGTTT ACCACTTGAGTTTTGGAGAGATTAAAGATTTCAGAGTTATTCCACAAATTTCATTGTAAAGTTTTAA BLAST |
Tissue | pods |
Gene name | LI_gene_174269; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_532763
Blastp | Nuclear transcription factor Y subunit A-9 from Arabidopsis with 37.98% of identity |
---|---|
Blastx | Nuclear transcription factor Y subunit A-1 from Arabidopsis with 72.29% of identity |
Eggnog | Nuclear transcription factor Y(COG5224) |
Kegg | Link to kegg annotations (AT3G20910) |
CantataDB | Link to cantataDB annotations (CNT0002912) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_014518789.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |