| Id Trinity | TRINITY_DN50052_c1_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_533243 |
| Sequence | GTGAATATGTATAGAAATATAATATGTGATTTTTCTGTTTGTTCTTTTTTTCTTTCTGTCATTCTTCGTTCATTTGTTTTTCTGGCTGTGTTGCTGGGAT TTTGTTGAACTGAGGTGGTTCTCTTGTCACATTTTCTCTCTTTCTGAGTTTTAAATTTTATATTTTGCTTATTTGCCACAAATTCATATGGGTTTGTTCA GATTTTGAGTAATCTATCTGTTTTCAAGGGAAGCTTGTGGGAAAAACTGTTCCTTTGAGTCAAGTTTCGAACGTGACATGCAATTATCTGGGTTTCACTG TTGAACATGCGATGAGAAAATTGCATGTGATGAGAAAATTATTGCTATGTTATCTCAGCCATGTATATAAGAGAAATTTCACTGTTAAAAATATGACCCT GATTTCATTTTATCTAACCTTTTTCTCAAAATTTAACTTACGTGAAGTTTTTTCCCAGTTTGTATAATGTAGAAAATGGTAGTTAGAAGCTTAGAGAGAA ACTTTGATTCACAGACTTGTCCTAATGTGTCTTGGACTGATCCAAGTCTTCAATTTCTGCAGGTAAAAATATGTAGCTTTAGAAGTGGGAGTGGATCAGA ATAGAGGGATTTTCCAGGTTGATCATCTCAGATAGAGAGCTTAATAGAGGCAGTACCATGAAGTCAAAAGGGGAAGCTGGGGCAAAGCCAATCATGGCAT TGGGTGGCCAAGTCTGCCAGATATGTAGCGACAATGTTGGGAAGACTGTGGATGGTGATGAACCATTCGTTGCGTGCGATGTTTGTGCTTTCCCTGTTTG CAGGCCTTGCTATGAGTATGAAAGGAAGGATGGGAAGCAGTCTTGCCCCCAGTGCAAAACACGATACAAGAGGCAGAAAGGAAGTCCGGCAATTCTTGGA GACGGGGAAGATTGCAGTGCCGATGGTAGTGCCAGTGACTTCAATTACGATTCAGAAAAGCAGAAAATTTCAGAGCGCATGTTGAGCTGGCACATGTCTT ATGGTCGAGCAGAGGTTGGCGCTCCAAATTATGGCAAGGAAGTTTCTCACAACCACATTCCTCATCTCACCAGTGGACAAGAGCTGTCTGGAGAGTTAAG TGCAGCCTCACCTGAGCAACTGTCAATGGCATCTCCTGAAGTTGGTGACAGGAAGCGAAATAATCTTCCATATTCGTCCGATGTTAATCAATCTTCGAAT ATTACGGTTGTGGATCCAGGATTAGGAAATGTAGCATGGAAAGAAAGGGTTGATGTCTGGAAGGTGAAGCAAGAGAAGAATGTTGTTCCAATGAGCACAG TCCAAGCTGCTTCCGAAAGAGGAGCTGGAGATATCGATGCTTGTACTGATGTGCTTGTGGATGATTCCTTGTTCAACGATGAAGCCCGACAACCTCTTTC TAGGAAGGTTTCTATTCCATCATCTAGGATCAATCCGTATAGACTGGTTATTGTTCTGAGGCTGGTTGTTCTGTGCATTTTCTTGCATTATCGAATAACA AATCCAGTGCCCAATGCATATCCAGTGTGGCTGGTATCAGTTATATGTGAGGTTTGGTTCGCTATATCTTGGATATTGGATCAATTCCCTAAGTGGCTTC CGGTAAACCGTGAAACATATCTTGACCGGCTTACGCTGAGATACGACCAGGAAGGAGAACCATCACAGCTAGCAGCTGTTGACATTTTTGTCAGTACTGT TGATCCATTAAAGGAGCCTCCACTTGTGACTGCAAATACCGTGCTATCTATTCTTGCTGTTGACTACCCAGTGGATAAGGTCTCTTGTTATGTCTCTGAT GACGGTGCTTCTATGTTGACATTTGAAGCCCTTGCCGAGACATCAGAGTTTTCAAGGAAATGGGTTCCTTTTTGCAAGAAGTACAACATTGAACCACGTG CACCTGAGTGGTACTTTGCACAGAAGATTGACTACTTGAAAGATAAGGTTCAACCATCATTTGTCAAGGATCGTCGAGCAATGAAGAGAGAGTATGAAGA ATTTAAAATTCGTATTAATGGACTCGTCGCAAAGGCAACACAGGTTCCGGAAGAAGGTTGGGTGATGCAAGATGGTACACCATGGCCTGGAAATAACACC AGAGACCATCCCGGAATGATCCAGGTTTTGTTGGGTCAAAGTGGAGGACTTGACTCTGACGGTAATGAACTTCCCCGTTTAGTGTATGTTTCTCGTGAAA AGCGTCCTGGCTTCCAACATCACAAGAAGGCCGGTGCTATGAATGCACTTGTCCGTGTACCTGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_174305; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_533243
| Blastp | Cellulose synthase A catalytic subunit 3 [UDP-forming] from Arabidopsis with 79.78% of identity |
|---|---|
| Blastx | Cellulose synthase A catalytic subunit 3 [UDP-forming] from Arabidopsis with 79.78% of identity |
| Eggnog | Glycosyl transferase, family 2(COG1215) |
| Kegg | Link to kegg annotations (AT5G05170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413701.1) |
| Pfam | Zinc-binding RING-finger (PF14569.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |