Id Trinity | TRINITY_DN50056_c0_g3_i16 |
---|---|
Name Transcript | Ll_transcript_533063 |
Sequence | CTTATCTGTACAATAATAGCATTGTTTAATAGTTTTCGGTGCTGACTAATCATTGGCACTGCCATTATCGATTTACATGAAAGAATCATTTTCATTTGTC TTTTGTTGTAATAAGTTTACCTTAAAAAACGGAACCTTTAAGGACAAGCAAACGAAAAAATGTGTCCTTTTTCAACACCTAGATTCTAATTCCAGCATTG GAAGGGTATTTGGAACCTCAACAAGGGATTGATATTTTGAGCTATTGATAGGGAGTTTCTGAAATGTATAGGCCGGTGGCTACTTCAGCCGTACCCCGGA GCGAGTTTCCTAATGGCAATGGGGACTCTGTTGTTATTTTAGATCAAATTCCGTGGTGGATTGATGCTGAGAATTCCTTGGGGTATGACAATGGAGATTC GAGTTCATACTTTCCCGATCCTTTGGCATCTCAGTTGGGAACCGAGAGTGATGGCAGTGGTTTGGTGTCAAGGTTTCCTGTTCATCATGAAGTTAATTCC AGGATATACTTGTGGTGGGGGAATCCATGGAATCTTGAGGTGGATGCTGTGGTTAATTCAACAAATGAGATTTTGGATGAAGCACACAGCAGCCCTGGGT TGCATGCTGCAGCTGGACCTAGTCTTGCAGAAGAATGTGCAACTTTGGGTGGATGTCGTACAGGGATGGCTAAAATTACCAATGCGTATGACCTTCCGGC AAGGTTTGAATATGGACCCCCAACCACCTTTACTACATTTTTTAAAGGTCATCGGCAATACCGTCTCCATTACCATATTGGAAGACCAGTGCAACTATGC AATTGTGGGAAGTTATCCATACTGTTGGCCCAAAGTATGCTGTGAAGTATCACACTGCTGCAGAGAATGCTTTAAGTCATTGCTACCGTTCTTACCTAGA GCTTCTCATCGAAAACAGGCTTCAAAGCATTGCTATGGGTTGTATTTATTCAGAAGCAAGAACTTTCCCCGTGAACCAGCTGCACATGTAACTATAAGTT ACTTCCACTTTACTTTCCAAGGGATAAGCATGAGGAGGAGGTGGCTTTGTCAAAGCTTCCTGCAGATGTTGGGGATGAGAACGGTAGATGATCGTAAAAT CAGAATAAAGCCTTTGCCTAAAGAAACTATTCCGAAACCTCCGGTTGATCTTCCTGTTAGTGATGTTGGCTTGGTTCTCAGGACTTCATATTTAGATTCA TTTCTGGATCCTGCCTTCATGTCCTTGATTAAAGACCCGGATGAAAGACGTTCGTAGCAGTGGGAGAAAACCATTCAAGCAGAAAGGGCTGGAATGTTGC TAAGTTGCTTGGACTTGGTGATCTTGGTGGACCTCCACTGTCTGCTGCTGCAGAATATTCTCTGCACTCTAGATATCTTTCTAAAGCAAATTCCTTAAAC TTATCCGAAATTGCAGAGATGAAAATTGTGTTTGGAAGAAAGTTGCATATGTTGATAAACTAATGCAGATTTTCCGATACGTACCCCACGAGCAGTTGAC CGTTCCGGATTTCGTATTTCAGCATGACTTAGAAGTGAATGGAGGAAAGGGTCTTATTGTGGAT BLAST |
Tissue | pods |
Gene name | LI_gene_174339; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_533063
Blastp | Protein GDAP2 homolog from Nematostella with 50% of identity |
---|---|
Blastx | Protein GDAP2 homolog from Nematostella with 33.04% of identity |
Eggnog | appr-1-p processing domain protein(COG2110) |
Kegg | Link to kegg annotations (NEMVE_v1g195342) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456715.1) |
Pfam | Macro domain (PF01661.20) |
Rfam | - |
GO | - |