| Id Trinity | TRINITY_DN50056_c0_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_533039 |
| Sequence | CATCGATTTACATGGCAAAAAAAATTCTTTTTTCTTTTTTTGTAAAAAATAGTTTAGCCTTGCAAGCTCATCGTCCATTCCAAGCGGCAATAAGAATAAA GTTTTCAACCCAAAAACGCAATCTTTGAGGACAATCTGAGAAAAAAGTGTGTATTTTTTCAACACCCAGATTCTAATTTCAGTGATTGTAAAGGGTGATT TGGAACCTCAACAAGAGGATTTGGTAAATAGAGCTGTTGATAGGGAGTTCCTGAAATGTATAGGCCTGTCTCTACTTCAGCCATACCACGGGGCGGATTG CCTAATGATAACGGGGATTCTGTTGTTACTTTAGATCAAGTTCCACGGTGGATTGATGCTGAGTATTCCGTGGGGTATGACAATGAAGATTCGACTTCAT ACTTTCCTGATCCTTTGGCATCTCAACCGGGAACCGATAGTGGTGGCAGTGGTTCGGTGTCAAGGTTTCCTGTTGACCATGAAGTTAATTCGAGGATATA CTTGTGGAGGGGGAATCCCTGGAATCTTGAGGTGGACGCTGTGGTAAATTCAACAAATGAGGTTTTGGATGAAGCACACAGCAGTCCTGGGTTGCATGCT GCAGCTGGACCTAGTCTTGCAGAAGAATGTGCAACTTTGGGTGGATGTCGTACAGGGATGGCTAAAATTACCAATGCGTATGACCTTCCTGCAAGGAAAG TTATCCATACTGTTGGCCCAAAGTATGCTGTGAAGTATCACACTGCTGCAGAGAACGCTTTAAGTCATTGCTACCGTTCTTGCCTGGAGCTCCTAATCGA ATATGGGCTTCAAAGTATTGCTACGGGCTGCATTTATACAGAAGCGAAGAACTATCCCCGTGAACCAGCTGCACATGTAGCTATGAGAACTGTGCGACGG TTTCTTGAAAAGCAGAAAGACAACATAACAGCCGTTGTCTTTTGCACAACCAACACAACCGATACTGAGATATATAAAAGGTTACTCCCACTTTACTTTC CAAGGGATAAGCACGAGGAAGAGGTGGCTTTGTCAAAGCTTCCTGCAGATGTTGGGGATGAGAATGGTGAGACTGTCATAGATGAGCGTAAAATCAGAAT TAAGCCTTTGCCGAAAAAGAATATTCCAAAACCCCCAGTTGATCTTCCTGTTAGTGATGTTGGCTTGGTTCGCAGGACTTCATCATATTTAGATACATTT CTGGATCCTGCCTTCATGTCTTTGATTAAAGACCCCGATGAAAGACGACTCGAGCAATGGGAGAAAACAGTTCAAGCACAAAGGGGCTGGAATGTTGCTA AATTGCTTGGACTTGGTGACCTTGGTGGACCTTCATTGTCTGCTGCGGAAGAATATTCTCTGCACTCTAGATATCTTTCTAAAGCAAATTCTTTAAATCT ATCTGAAATTGCAGAGATGAAAATTGTATATCGTGGAGGGGTAGACAGTGAAGGTCGTCCTGTCATGGTTGTTGTGGGGGCTCATTTTTTGCTCAGATGT CTTGATCTGGAGCGATTTGTGCTCTACGTAGTGAAGGAGTTTGAGCCGATAATACAGAAGCCTTATACTATTGTCTACTTCCACTCTGCTGCATCTCTGC AAATGTAAGTGTTAAATAATGGAATTCTAGAATTTGCAGTTTTGTCTATTCTTTTTATGTTTTTAGAGGTAGAAAATATGCTACTGGTAAGAGGAATGAG CTAGGATTTACAAATTATTTATATAAAAAAAGGTGGCCCAGTGCATGAGGCTCCCACCTCGTGGGTTTGAAGAGGGTAGACGTAAACAGTCTTACCCTCA CAAGGGAAGATGTTGTTTACAGAATTTGAATCCATGACCTCCAGGTCACAAGGTAAGCAACCTTGCTGTTGTGTTAAGTCAAGCCCTCCTTAGACCCTAC TAGGTGTAAGAGAAATGGGCTAACTCTTACATTGTGTGAGTTGTGTGATTACATCAAATATATCAAACATTGCCGAAGTTCATGTAATTCATTTTATTCA TGAGAATAAGGGTACTGGATATTCAACTTGTCAATATATGTAAAATATGGTTGCATTTGCTTTTGAGCTTGTATTCATCTATAGGAGTCATTTAATTGTC AAATATCTCACATTGTATGTGAGTACTTTTCACAGTTGCTAAACTCATCTGTGTGATCACTGTAGCATGAAATCTTGAAATTACATAACTTGCAGTTACA CACTTTTGTCAAGGTTGGTTCTGCAGCATTTTACTGCTTGTTAACATTACTAAATCGTATTACATAACCCCATATTCAAATTGGTTAATCCTTTATTTGA TGCATTGTGGTTTCGATATATAATCCATCTTCGAGGATAATTTTTCTGTTAAATTTAAACTCACTATTATTTTGATACCATATTGCTAGCTTAAGTAGTT AACTTTATGTAACAACTTAAGAGCAACATGATAGTTTTTTGGATAAACTGTTCTATAATTAGTTGAGGATGTAACACTGGGTGAAGCATACTTGAAAGTT AAAAGAAAGAAATACATAGGAAAAGAAGTATGCTTTGAAGGTAGTTTAAGAATATTAAGCATAAGCAGGTTGCTCCAGATTTGTGTAATGTTAGTAGTAT AGTTTCTTAATGCTTCTACTTTCACCTTTCTCCATCCGGTTTTTTGTTGGTATAAATAGGCAACCGGACATGGGTTGGATGAGAAGACTACAAGAAATAC TTGGCCGCAAGCACCAGCACAACCTTCATGCAATATATGTCCTTCACCCAACTTTAGGACTAAAAGTGGCAGTATTTGGGCTTCAGTTGCTTGTGGACGC AGCGGTATGTTACGGATCACATTTTATTAGTGGAATTTAAAATATTCTAGAGACATGTTATACATATTGTTATTGGAAACTAACTTTCAGGTTTGGAAGA AAGTGGTATATGTTGATAGACTACTGCAGCTATTCCGATATGTACCTCGTGAGCAGCTGACTATCCCAGATTTCGTATTTCAGCATGACTTAGAAGTGAA TGGAGGAAAGGGTCTTATTGTGGATCCCAGAACAAAATATGTATATCAAAGACCATGAACCTGTCATGCAGTTCTCTCATCAGTTGATAAAGAATAATTC ATCATTTGCTGTAGTTTCTTATTTTTTTGGAATGGTTGATATGTTTGAAATGTATATGGGAGGGTCCATTTTCTTTACTTTCTGAATTTTTTGAAGCATA AGTTTCTCTGTAATTAACATCATATCATATAAAGAATATTTTTCTCTGTAATCTTCCCAAGTTTGAATAGATTTCAAGGTGATGAGGCTAGCAGGTTGGC TTTGTGTAAATGTCTTGAATATATATGGCTGCAGATTCAAATAGAATCAGGTTTTGAAGATTTTCATTTCTTATTGCATC BLAST |
| Tissue | pods |
| Gene name | LI_gene_174339; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_533039
| Blastp | Protein GDAP2 homolog from Nematostella with 36.95% of identity |
|---|---|
| Blastx | Protein GDAP2 homolog from Nematostella with 36.13% of identity |
| Eggnog | appr-1-p processing domain protein(COG2110) |
| Kegg | Link to kegg annotations (NEMVE_v1g195342) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456717.1) |
| Pfam | Macro domain (PF01661.20) |
| Rfam | - |
| GO | - |