Ll_transcript_533360

• Id Trinity: TRINITY_DN50057_c0_g1_i20
• Name Transcript: Ll_transcript_533360
• Sequence: GGGAAGAAAAAGAAAAGCAAAGGTAGTTATTTTACCTAAAGGAAAAGAAAAGAAAAGCAAAGTAACACGCTTATGTCTGATTCAGTTGAATTAAATGCAA TTGGAATACGCGTGAACTATAACCAACAACCATTACATATCTTCTTTTTATTCTTCTTCCCAACGCCGCATTTTCCACTCACTTTCTTTTCTTTCTCTCC ATTTTCCATCTACTTATAACCTAAATATAAATTATTTATCATCACCATAGACTCACTTTTTGATCATGCTACGTTTGTGTTATAGTCCTCTTGATTGTTG CTTCCGACGCGGTGCCGGTGACGGTGCCGGTGACGGACTTCTATGGCACACTGAATTGAAGCCTCACGCCTCCGGCGAATTCTCCATGGCCGTCGCTCAA GCCAATTACAGTCTTGAAGATCAGAGTCAAGTATTCACCTCCCCCTCCGCCACCTATATCGGCGTCTATGACGGTCACGGTGGACCCGAAACTTCTAGAT TCATCAACAGGCATCTCTTTTCTCATCTTCACAGTAATTAATTTCCTCTTCAAAATTCGTTTGTTTTTGTTTTTGTTTTGCTTAGTGGTATTGGTATTTA TGGAATAATAGAACTTGTTTGTGTAATTTATGAATTGTGGAAGCAACAATTTTAAGATCCAAAGGAGGTTCTAACTTGCTTAACTGGGTCCTGAATATGC TTTTGCTTATGTTTTGATTGTGCAACTACTCACTTGTTTGTTAATTTGATGTGTAGAATTTGCCACTGAACAAGGGGGATTATCGCCGGATGCGATTAAA AAGGCGTTTAGTGCCACGGAGGAAGAATTCTACAATTTGGTGAAGCTGTCAATGCATATTAGTCCTCAAATTGCTTCCGTAGGATCGTGTTGTCTCCTTG GTGCAATTTCTAATAATGTGTTGTATATTGCCAACCTCGGCGACTCTAGAGTTGTTCTTGGCAGGAGGGGTAATGAGAGCAAGAGATCTCCGGTAGTGGC AGAGCGGTTGTCAACTGATCATAATGTATCCGATGAAAATGTAAGAAGAGAAGTCGAAGCCCGCCACCCTGATGATTCACATATCGTGGTTTATACCCGT GGTGTTTGGAGGATTAAGGGTATTATACAGGTATAGTAATGCCTTGGTGTTTTTCACCTTCGGTATCTTCATGGCTTTACGATTAATCATTATCTGCATG ACAAAACTGTGCTTAATTCTAAAACTTATGTTGAATAGAGATAAATAGCTTGATTATATATCCATACCGTGGCGAGATGTGTCTGATTGTACATAATATC TTATCCTTACCAGTTTATGTATTCTATATCTTCTCCTTTCCAGTTTTGGCCTTACTTTACCTACTATGAATTTGATGTATTCACTGCATTCTACATAAAT GTTGTACATAAACTGAGGTTTTCTGTAAGTTGTTAAAACATAAGACTAAGTACTTAGATGCTCTAATCAATGATCTCCTTCTTTTCCTTCCGTACGTGCA TGCCTACCTTCTAAGAGAGAGGCGTTCGCCTATGATGGGGCATGGGAATCTGATAAGAGGATTTTTTCTTTTTCAGGTGTCGAGATCTATTGGCGATGTG TATCTGAAGAGACCTGATTTCTTTCGAGACCCAGCTTTTAAGCGATATGGAAATCCTATTCCTTTGAAGCGTCCTGTAATGACAGCTGAACCGTCAATAA TTACCAGGGAGCTTGAGCCTGGAGATTTGTTCTTGATATTCGCATCTGACGGCCTTTGGGAACAATTAAGTGATGAAGCAGCAGTTGATATTGTTTGCAA ATATCCTAGAGCAGTGAGTTTCTTGTATTACTTGTGAGTTGTGAGTTGCATATAGTGATTGACTTCGTACATTTTTTATATGGATTCTGATTTCTGGTTC TGGTAATTGTAGGGAATTGCAAAGAGATTAGTTAGGACTGCTATTCAGAAAGCTGCAAAGAAGAGAGAGATGAGATATGCTGACATAAAGAAAATTGACA AAGGAATAAGAAGACACTTCCATGATGATATCACTGTTGTAGTAATCTTTCTTGATCACCATAAGGGATCCTCTCATGGAAGATTTAAGCAAACCACTGT TAGCTGTACAACTGCACCTGTCGATATTTTCTCCCTAAATTCGGAAGAAGCCGAAGCAGAGAAGAGCATGCTTCGTTCAGCTGGCTGAATACTAAAATTG CTTCAAAGAATCAAACATTGTCTTTATTTAGGATTAAATTATTAATAGGTAAAGGTGGATATTATTAGTAGAAGTAGGGGAATCTTGGCATAGATATACT TCACTGGAATTTGCTGACAGGTTCTTGCTATTGCAGATAAGAATATGTATAGTTTTGAAGTCTTTTGTTTTGGATTTAATGATATTTATTATCAATTTTG TTTTTCTTCTGAAAGAAATAATAGAATTTGTATTGTTTTTCATGAATCATGACTTTGATGAATCATAACTTATTTCCATTTAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_174342;
• Additional information: details;

Expression of Ll_transcript_533360

FPKM

• PAB: 5.5
• PNAB: 0.8
• PS1: 3.6
• PS2: 0
• PS3: 0.2
• PW1: 6.6
• PW2: 1
• PW3: 8.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_533360

• Blastp: Probable protein phosphatase 2C 63 from Arabidopsis with 74.39% of identity
• Blastx: Probable protein phosphatase 2C 63 from Arabidopsis with 56.78% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT4G33920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452483.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;