| Id Trinity | TRINITY_DN50058_c2_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_533732 |
| Sequence | GAAAAATATGTATGACCATAATATGGATCAATTTTTATATTATAATTCAATTTATATTCAAAGTCATTTATCAAAAATTCATTTATATTTTTGTGTGTGA AAAATGATGATTCGGTAGCGTAAAAAACTCAATATATACATTTTTTCGTAAATATAAATATCCCCATTTATGTTTTTATTTCTTTCTCTCTTTTTATCCT TCCTTGCAAATTAAGAGTTTGAGTGGAGGGAAAGTGATTACTTTTTTCTCACCCACACTCCTTCTCTCAGTTCTTGATCTCAGCAATCTCTGCTTCAAAA ATGGATTTATGTATTATCACTTTGATCCTAATTGGGTTTGGTTTTGGTGTTGTGGCGGTTATTGCTGCTGAAGCTTTTGGAGTGTTATGGATTATGAAAC GGTTGCGTCACAAGGCCAATAAAGACCAATCCAAATTTTCCAAACTAGCTGCTTCTGCATCAGACCTTGACCCCAATCAATCCATCAATTTTGCCACCAA AAAGCAGGGCTTGCTCTGGGTTCTAGAATCTGAAAAAGTTCCAAAGCTTGGGCTGGAAAAACCGTTAGTAGAGCAAAAAAGAAAAAAAGAGCTCTTGGAA GTTTCCCCTGTTAAAATTTATGGCCAAATCAAGGGTCAATCACTTATTCTGAGAGAACCTGAGGGTTCACATGTAATTATTGAACTAAAGGGCTGCACAG TTCAAGCCGTGTCAGCATCAAGCCTTTCTTCAAGAAAATGGGCAAAAAAATTTCCCATCAAAGTGGAAAGTAAGACCTCTGTAATATATAAAGGAAGCAA AACTCTTTACATATATCTTGAAACTTCATGGGAGAAAGAAGCATGGTGTAAGGCCCTGTATCTAGTTTCATGTGATCAACAGGAAAAAATTAAATGGTTC ACCCAGTTGCATGAAGAGTTTCACAGTTATCTGACATCCTTAAATTCTGTGTATCATTCTATTATAAAACCATCAGTTGGAATAGAATCAAATTTGGAGG CAATAGAAAGGGCTAGTAAGCCTGATGGTACTTCCTCAAAGGTTCGTCAATTTTTGAAAAAGATTTCAAAAAGAACTTCTCGAGTCAATTTGGAAAATAT ATCAATGTGGACTTCATCGTCAGGCAATGAAGAAAAAAATAAGACCGATAAGCTTCGTCCTTTCAAAGATGCAGTTTTGGCCACTGGCTACATGAAAACT GCTTCAACAGCTAAGCAACTAAGGAATTCCTTGGTAGACGATCCTCCACCATTATCTTCAAAGTCATCTCAATCTGGAAGCCAGAATCATCATTCTACCA TCTCTAGTGCTGATGAGAAGTATGGTATTGATGAAGGAACATTATGTTGGAATTTGTTAATTTCCCGGCTCTTCTTTGATGTGAAGGGCAATGCACAGTT AAAGAAATCTACACTAGCAAGGATTCAGAGAACATTGTCTAATATGAGGACTCCCAGCTATATTGGTGAAGTCATCTGTACTGACATGGATACTGGGAAT GTTCCACCTTGTATCACTGGAATGAGGGTTCTTCCTATGGAAATGAGTGAGGTATGGGCCTTAGAAGTCGACATTGAATATCACGGAGATTTAGTACTAG AGATTGAAACAAGGCTTGAAGTTCGTGAGCTAGAGCTCCAGAGAGGCACAGAGGATTCAAATCCAGAGGCAAGCAATTTTGGATCTGTCCCATCCTATTT TCTTGAAGGTGTTGAATATTTTGGAAAGCAATTGAATCTCTTTGAAAGAACAAATGATTTACAAGAGCATAAGGAAGGTAGTTATTAGAACAGTGTTTTG TAAATAGGTCATATCAAATCCAATTATTTATTTACTTTCTTTGAGTCCTATCAAACCCAATTACTTAATAATTTTCTCCATCTCCAGTCAAACCCAATGT TCTGTGCTCTTTCATTTGTTTCCTGAAAATTCATTTGAACTTAATTGGTTGTCTCAGAGTACATCTAATCCGTTCGAGACATGAGGTCACACCACTTTCT AAGATTGTCAGTGCACCTTGTTTTGCTGTAATTTCATACTTTATAAACTGAGTTTACAGGTAGTTAGAGAAGACAGAGCAGGGTCTCCCAAACCAATAAC ATTATACCACTCATGGTGCTTTTGCATGAATTTATAAGTTTTTCCAATTACAACAATGACAAGGAAATTGTTCTGGTTTACTGGTATTCATTGTAGTTTA ATTCCCCCTTGTTTCAGTAGCAGATACCTCATTGGCTGTTTTTGTTCTGTTTTTCTCCTAAAATAGTAAATAAAACTTTCCAAAACGTGGAGGAGGGAGT ATAAATAGTTTTCATAAGTAGAGTGTTGTATAAAGTATTTTGTTTTATAATGTCCATGTGCTTATTTTCCCTAAGCAGATGTGAAGAGCACTGCATCTTC CTCGACTCATGGATCAAGATTGAAATCTATGTTTAATTCTGTTGCCAAACAGGTTTCACAGGTATCCCCTCTTCATTATTCACCTTTATTCCATTGGTTG CTTCTTCCGACTAACCTTTTGCTGCCCATTTTTCTCTATTTTTTCATGCACATGGAGACACATTTTAATATTTGATAATGTACATATGATGTATTACTGT CTACTCATCAGTCTGATTATAGACAGCTAAAGCTGTTTTATTCTCTGCATAATGGATTATTTCTTATGAAAAGGTTCCTCTCTCTTTGGCGATAAGAATG GCTTCCCTCAGAGGGACATTACGTTTGCATATAAAGCCACCTCCCTCTGATCAATTGTGGTATGGTTTCACATCAATGCCAGATATAGATTTCAACTTGG AGTCATCTATCGGAGACCATAAGATAACTAGTGGGCACTTTGCTTTATTACTGGTCAATAGGCTAAAGGCTGCAATTCAGGAAACTTTAGTGCTCCCAAA TTGTGAAAGCATTTGTATCCCATGGATGATAGCAGAAAAGGATGATTGGGTTCCTTGGAATGTTGCTCCTTTCCTATGGATTAACCAAGAATCCGGGAAT AAGACTTCCACTTCAATTGATTCTAGTAATCAACCTTCTAGTGGAGTGGAAGCTAGTGCAAGCACCTCAAGTAATGGTCCTGAGAACGAACAGAAAAAAT CAAAAAGTGCCGAAACTAGTCAAGAGCCAGGTAGAAAATCATCAGATTCTCTTCCACTTCCATCAAGTTCCTCTGGTTCACCAACTCTAGAGAGTAGCAG TTGTTTGGAAGAACTGACAACACCTTTGTTAGACAATGACAGACCACAAGAAACTATAGATTTGATAGAATCTAGGACACCTTCGTTACAGAGTGACAAA GGACACGAAACCACTGAACAGAAGATGGAGGATAATTTAGAGTTGCAGAAACAAAATCATTCTACCAAACAGGAAGATGGAATGCCAAGGAAAATGGGGA GAAAGGAAAGGATGCTTGATTTGAGGAAGAAGATGAGTGAAAAATTAGAAGAGAAAAGGCGTCACATCGAAGAAAAGAGCAGGCACATTGTTGAGAAGAT GCGTGGACCGTGAGAGATATAAACCAAGTAAATGGCAGAATGCATACATGCTGCCATTCATCTGTTGATTATGCAAGAGACAAGTATAATTTGAGGTATC CGATCTTGTTTCATTCACGAGTTGTACATTTTCTAAGTGATTAGAGCATCAAATTGAACTAGACATAAGTTAATGATCCTAGCACAGAATAGATTGTCCA TGCATGGAGGAGTTAAAAAAATTGGTGATGTAGTTCTGTTGTAAAATTGCCAAGGCCACAGGTATGATGGGAAATTTATTGAGTTCTATATATATTATAG ACTCATGACTCAATTTTAGAACTCCACCTGTAATTTTTAAGATGAATACTGGTGCCATAACTAATAGAGGGGGTTATATATTATATTAAAATTAAAGTAT ATATATCATATGTAAATATGAATAAGGTAGCATCTGGTTTTTGCCTAACTATGTTTTTGACTTTGTGAAGTGATGGATAAGGGGGATAAAATGTAAATGC ATCTTAAGGTATAAAAATTAGTATTGACATTAATAAATGTTACAAACAGTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_174352; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_533732
| Blastp | Uncharacterized PH domain-containing protein YPR091C from Saccharomyces with 26.36% of identity |
|---|---|
| Blastx | Testis-expressed protein 2 from Mus with 32.58% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YPR091C) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452411.1) |
| Pfam | Maintenance of mitochondrial morphology protein 1 (PF10296.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |