Id Trinity | TRINITY_DN50058_c2_g3_i8 |
---|---|
Name Transcript | Ll_transcript_533731 |
Sequence | TGACAACCACATATAATAACCTGCACAAATGTGGTGACTGTCATCATCGTGTTCACGTCAGTTACATTAACCCATTTTTGTTGAAGCACGACAATCATAT CATGCACACATAAATTATGAAAATTCCTCTTTTACAATTATTCTGAAATCATTTCATTTTCATCTTTCTAATGCACTTTCTCTATCTCACCGTTATTCTT AACCCATTTCTCTCTCTCTTTTATCGTCTCTGTCCTTTCACACCCAACAAAAGTAAGAAGATTCAAAGAAGAATAATAATAAAGAAAATTATTATTTCCA CTGTTTTTAACAGCATCTGATTCCAATTCTTCCGAAAGTTTCCATTTTTAACCCCATTCTCCATCTGGGCATCTAAATCCTCATCTGGGTTTCTAGAATT TCTGATTCAAATTTAGAATTTTGTACAAAAATGGTTCTGGTTTTTGCTTTGATTTTGTTGGGTTTTATTCTTGGGGTGGTGGCTGTTGTTGCTGCAGAAG CTTTTGGACTTTTATGGATCCTTAAACGACTGCGTATCAAGACCGAGAGAGACCAAACCAAAATCTCTTCCAAAACCCAACTTTCTTCTACTGATCCTCA CCAATCACTCAATTTGCCTTTCAAAAAGGAGGGTGTGGTTTGGGTTCTAGAACCAGATAAGGTGTCAAAATACTGGCAGGAGAAGCCATCAAGAGAACAT AAAAGGAAGAAGGAGCTCTTGGAGGTTTCTCCGGTTAGGAAGTATGGAAAAATTAAGGGTCAAACACTTGTTCTCACAGAACCCGATGGTTCGCACAGAA CCATTCAACTCAAGGGCTGCGTGGTTGAAGCTGTTTCAGCAACAAACTATTCTACGAAAAAATGGGCAAAAAAGTATCCTATCAAGATGGAAAGCAAGAC CTCTGTGATATATCATGGAAGTAAAACTCTTTACATATATCTTGAGACTTCATCTCAGAAAGAGGCATGGTGTAAGTCTCTCCGTCTGGCTTCATGTGAC CAAAAAGAAAAATTGGAGTGGTTTTCCGAGTTGCATGAAGAGTTTCGAAGTTATCTGACATCATTAAATACTGAATATCATGCTTTTATGAAGCAATCAG TTGGATTTAGTGTTGAGCCAATAGAAAGGGCTAGTAAGCCTGATGGTTCTTCCTCAAAGGTTCGTCAGTTTTTGAAAAAACTCACAAAAAGAACTTCCCG AGCTGGTTTGGATAATAAATCAGTTTGGACTTCAATATCAAGCCACGAGGAAAGAAAAAGCATTGACAAGCTCCGTGCTTGTCAGGATGCAGTTTTGGCC ACTGGCTTGATGAAAACTGCTGCTCAAACTTCAAATCATCTGAAAAGTTCCATGTTAGAGAATTGTCCATCGTTATCTTCCACCTTATCTCATTCGGGAA GCCAGAGTCAGATATCTGTCAGTTCTGATGCTGATGGTGATGAAAAATTTGGAATCGACGAAGGAACATTATGTTGGAATTTGTTGATTTCCAGACTATT TTTTGATGTCAAATCCAATGCGCATATGAAGAGATCCATTCAAGAAAGGATTCAGAGGACGTTATCTAATATGAGAACTCCCAGTTATGTAGGGGAAGTC ATCTGCACAGACATCAATACTGGGAATGTTCCACCCTGTATCATCGGAATGAGGGTTCTTCCTATGGAAATGAGTGAAGTATGGGCTTTAGAGGTTGACA TTGAATATTCCGGAGGTGCAGTACTAGAGATTGAAACGAGGCTTGAAGTTTGTGAACTAGAGCTCCAAAAGGGGACAGAGAGCTCAAATCCAGAGTTGAG CAATGATGCGGCTGTCCCATCAGATATTCTTGAAGGTTTTGAATATTTTGGCAAGCAATTGAATCTTTCAGAAGGAGCGAATGAATTGCAAGAGCCAAAA GAAGATGGTGTCTGCAATACTAGTCAGTACACAGATGTGTCCAAGAGCTCTAGGAGTACTAGCACATCATCCACAACTCATGGATCAAGATGGAAATCAA TGCTAAATTCTGTTGCAAAACAGTTTTCACAGGTTCCTCTCTCTTTGGCAATAAGGGTAGCATCCCTTAGAGGGACACTGCGTTTGCATATAAAGCCACC TCCCTCTGATCAGTTGTGGTATGGTTTCACATTTATGCCTGATATAGACTTCAACTTGGATTCATCTGTTGGAGAACACAAGATAACTAATTCACACTTT GCTTTATTCCTCGTCAATCGGCTTAAGGTACGTCGGCTTCCATTCCATTTTGGTTTTTAAGTTATGGAAGGATGTATGTGGTTATTTATTTTTTTCTTAA TGCAGTTGTTTAGAGTTTTGAAGCTTCAATTATGTTGTTCATTACCATGTCCTTCTTGTTTAATATATGCACAAACAATTCACATGTACCATCAGTATTT ATACACACACAAGAATTTCTCTGGGGAACAATTCAAGGAAAGTTCTCTTTGCTTTTTATGTCAGTTCATATCCGTGTAGTAAAGCTAAATATATTTTTTG ATACCCTTCCATCTGTGTGTATGTGTGGTTCAGTAAATAACAATCTCAGTAAGTTTTAGTGGACATCTAATTCTATGGTACTTAGTTTCGGATGGTTTAT ATAATCTCTGAGCGGAAACCTGAATCAACGGATCAATCTTTCTTAAATATCACAATTAGTGTGATTTCAATTCCATTTTTTATGGTGTTTCCTATTCTAT GTGTTGTATCTCTTTGTCTTGTTCTTAACAGAAGCCTTCTTTAGTTACTACATATGTGTGTGTATGTATTATACTTTGTTCTGGGTGGTTGACATCTTCA ACCTCGTGTACTCTTAACAGACTGGAAAAAGTCTTTATATTTCGGAAAGGAGCAGAGAATCTTTAACTTGCAAACTTAATTTCTCTCCCGCAGGCAGTAA TTCGAGACACTTTTGTGCTCCCAAATTGTGAAAGTATATGCATTCCATGGATGCTAGCCGAAAAGGATGATTGGGTTCCTCGGAATGTCGCTCCATTCAT ATGGGTTAACCATGAATCAGGGAATGACCCTTCCTCTTTAGTCGATGATACTCAACCTTCCGGTCAAGTGAAAGCAAAGTTGGACGCTAGTGCAAGGACA TCAAGTCATGGCCCAGAGAACAAACCACAACAACCAAAGAGAGCTGAATCTAATCGAGAACCAGCTAGGAAATCAGATTCTCTGGCACTTCCATTTACTT CCTCAAGTTCAATGACCTTAAGGGGCAGCAGAAGTTCGGAGGAACTGACAAGACCCCTGTTAGAGAGTGATAAACCACAAGAAGACTCGGAAGAACCAAG ATCACCTTCGTTACAGAACGAAAATACACATGAAGCTAGCGAAGTGAAGATGGAAGATATATCTGATTGCCAGTTACCACCTCGAAGTGGCGTGTTGGAT AAACAAAATAGTTCTGTTGAACAAGATAAGTCCAAGGCAAAGAAAATTGGGAGAAGGGAAAAGATGCTCGATTTGCGAAAGAGGATGAGTGATAAATTTG AAGAAAAGAAGCGTCATCTTGAAGAAAAAGTAGAAACATTGCTGAGAAAATGAGATAATCATGACAAATATAAACAAAGTAAATTGTCAGAATGCTTATA TTTGTTAGTGAGTATCCGATATTGTTTCATGGATGAGTTGTACATTTTCTAGGGGCTCAGAAGATAAAGTAGAAGTAGATATGTGTTACAGAAAATGTTA TTGGCTTATTGCATTCCTGAGTTCAAAATTACATTGACCTGGTCATGTTGTAAATGTGCAATAGCTATAAGGTATGATAGAAGATTCATTGAATTGTTGA GTACCAATAATCTTGTGCGGATAAATACTATACTATATATATTCATAGCTAACTCATTTGTATTATTTTGTATACCTAAGTTTCTATTAATGCATTATAA AATAAACAAGAACCATATTCAAAATâBLAST |
Tissue | pods |
Gene name | LI_gene_174353; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_533731
Blastp | Testis-expressed protein 2 from Homo with 20.38% of identity |
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Blastx | Testis-expressed protein 2 from Homo with 20.53% of identity |
Eggnog | Testis expressed 2(ENOG410Z3SZ) |
Kegg | Link to kegg annotations (55852) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458337.1) |
Pfam | Maintenance of mitochondrial morphology protein 1 (PF10296.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |