Ll_transcript_531996

• Id Trinity: TRINITY_DN50060_c3_g3_i2
• Name Transcript: Ll_transcript_531996
• Sequence: CCTAGAACAATATCATAGTATAACTCACAGAACCCCCAAATCTGAAACCCTAATTGCGGTTCCAAATCAAATTCCATCGAAACCACGTCTCCAAATTCAA TTCGGTGTTGGTAATGGCAGAGCACTTGGCATCAATATTCGGAACAGAAAAAGACAGAGTGAATTGTCCATTCTACTTCAAAATCGGAGCTTGCAGACAT GGTGATCGATGTTCGCGACTCCACACAAAACCTAGCATAAGCCCTACAATCTTGCTCTCAAATATGTACCAACGCCCTGATATGATCACACCCGCTGTGG ACCCACATGGTAACCCCATTGATCCTCATAAGATTCAAGATCACTTTGAAGAATTCTATGAAGATCTGTTCCAAGAATTATCCAAGTGTGGCGATATCGA AAGCCTCAATGTTTGTGACAATCTTGCTGATCATATGGTGGGTAATGTGTATGTTCAGTTTAGAGAGGAAGAACATGCTGCAAATGCTGTTAGAAATCTC ACTGGAAGGTTTTATGCTGGCCGGCCGATTATTGTTGACTTCTCACCGGTAACAGACTTCCGTGAGGCCACGTGCAGGCAGTATGAGGAGAATACTTGCA ACCGTGGTGGTTATTGCAACTTCATGCACTTGAAAAAAGTTGGCAGGGATTTGAGGCGCCAATTGTTTGGGAGGCACCACATAAGGCACAGCAGAAGCAA GAGTCCTTATAGGCATCAAAGCCATGAGGAAAAATCGCATCGGGGCCATAGCAGCAGAAGGTATGATGACAGAGACCATCATCATGAAAGTCGTACGAGG AAACACAGGAGTACAAGCCCTGAACATAGGAGAGGACGAAGTCGTAGTCAAAGTCCTCGAGGAAGGAAGAACCGTAGTCCAGTGAGAGAAGGCAGTGAGG AAAGACGTGCCAGAATTGAGCAATGGAACAGGGAGAGGGAAGAGCAAGAACATGCAAGTAAGGTTGATACCGAGGAAACCAACAATGGATACAATGGGCA CCCGCAAAATGGTAGCAAGTTTCGTGGGTATCAGCAGCAGCAAGAGCAGCAACAGCAACCTTCTCAGTAGGGTTATCGATCTGTTTATGTTATACGGTTC ATGGTGTGGTCTTGAAGAATGTTTTAATGGAATCTTTCAGGTTTTGTTTTGAAGATCTCAAGTAACTGTGTTAGGATGAATTTGTAGGGTACACCTTCTG TTATATGGTTTTTTTTGTTATTCAGACAAAGCTAGATCCTGCTTAAAAATAAGTGTGATTATACAAATGATCATTATTGAAATTTATAATATTTTTGTAG CTACTTCAAACACTTATTTAGATTATACCTCAAAACATTTCTCCAATGCCTCCACCAACCTCTACAATTCATAATCATAATCTTATAATCTTGCGCTAAA A
• Tissue: pods
• Gene name: LI_gene_174382;
• Additional information: details;

Expression of Ll_transcript_531996

FPKM

• PAB: 2.6
• PNAB: 1.1
• PS1: 4.5
• PS2: 2
• PS3: 4.5
• PW1: 3.3
• PW2: 3.5
• PW3: 7.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_531996

• Blastp: Splicing factor U2af small subunit B from Arabidopsis with 66.55% of identity
• Blastx: Splicing factor U2af small subunit B from Arabidopsis with 66.08% of identity
• Eggnog: auxiliary factor(ENOG410Z5PX)
• Kegg: Link to kegg annotations (AT5G42820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436316.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;